Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0145 ATGAACAACAGTGGTGTCGGAGGAACTTTGATGGGTTTGAGTAGTAATAATGGGTATGATTATCATCATGGGCATGGGAGGTCGTCGGCGTCGGCATTCACAGTGTCTCAGTGGCAGGAACTGGAGCACCAAGCTTTGATCTTCAAGTACATGCTTGCGGGTCTTCCTGTTCCTCCAGATCTCGTCCTCTCCATTCAGAACACTTTCTTTCACCATCCCACATTGAGTTATTGTTCGTTCTATGGGAAGAAGGTGGACCCTGAGCCAGGACGATGCAGGAGGACCGATGGAAAAAAATGGAGGTGCTCCAAGGAAGCATACCCAGACTCCAAGTACTGCGACCGTCACATGCACCGTGGCCGCAACCGTTCAAGAAAGCCTGTGGAATCACAATCACAATCACAAACTTCAACTGTCACTGTTTCTGCCACCCCTGCAACTTTAAACTTCCAAAACCTTCCCACAAATGCCTTTCCTACTCATTCTGGAACTCACCGCACCAATTATCATCTGGATTCCATTCCCTATGCCATTCCAAGTAAAGATTACAGGTATCTTCAAGGACTTAAATCTGAGAGTGGTGAACACTGCTTCTTTTCTGAAGCTTCTGGAGGCAACAAGGTTCTCCAAATGGAGTCACAGTTGGAAAACACATGGCCTTTGATGTCAACCAGAGTTGCCTCCTTTTCTACATCAAAATCAAGTAATGATTCCCTGCTGCATGGTGATTATCCCCAGCATTCGTTTTTATCCGGTGAATATGCGTCAGGAGAACATGGGAAGGAGGAGGGCCAGCCTCTCCGACCTTTTTTTAATGAATGGCCTAAAAACAGGGAGTCATGGTCTGGTCTGGAAGATGAGAGATCCAACCAAACAGCCTTCTCCACAACTCAACTCTCAATATCCATTCCTATGTCTTCCAATTTCTCTGCAACAAGCTCTCAGTCCCCACATGGTGAGAATGAGATTCAATTTAGGTAA 981 0.4628 MNNSGVGGTLMGLSSNNGYDYHHGHGRSSASAFTVSQWQELEHQALIFKYMLAGLPVPPDLVLSIQNTFFHHPTLSYCSFYGKKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCDRHMHRGRNRSRKPVESQSQSQTSTVTVSATPATLNFQNLPTNAFPTHSGTHRTNYHLDSIPYAIPSKDYRYLQGLKSESGEHCFFSEASGGNKVLQMESQLENTWPLMSTRVASFSTSKSSNDSLLHGDYPQHSFLSGEYASGEHGKEEGQPLRPFFNEWPKNRESWSGLEDERSNQTAFSTTQLSISIPMSSNFSATSSQSPHGENEIQFR 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0145 326 MobiDBLite consensus disorder prediction 127 141 - -
Aed5g0145 326 MobiDBLite consensus disorder prediction 251 272 - -
Aed5g0145 326 ProSiteProfiles WRC domain profile. 86 130 IPR014977 -
Aed5g0145 326 ProSiteProfiles QLQ domain profile. 32 67 IPR014978 GO:0005524|GO:0005634|GO:0006355
Aed5g0145 326 PANTHER - 30 312 IPR031137 GO:0005634|GO:0006351|GO:0032502
Aed5g0145 326 Pfam WRC 87 129 IPR014977 -
Aed5g0145 326 MobiDBLite consensus disorder prediction 305 326 - -
Aed5g0145 326 Pfam QLQ 32 66 IPR014978 GO:0005524|GO:0005634|GO:0006355
Aed5g0145 326 PANTHER GROWTH-REGULATING FACTOR 5 30 312 - -
Aed5g0145 326 SMART QLQ_2 31 67 IPR014978 GO:0005524|GO:0005634|GO:0006355
Aed5g0145 326 MobiDBLite consensus disorder prediction 113 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0145 Aed-Chr5 1085794 1088702 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0145 33 129 GRF Transcription Factor Family AT3G13960 59.259 1.08e-41 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Aed5g0145 WRC 3.1e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0145 - - gmx:100787567 531.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0145 5 1085794 1088702 Aed5g0145 5 1085794 1088702 ECH