Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0143 ATGGCACCTACTCGGAATGTCGCTGATTCGACGCCTCCGTCAACAACACCCGAAGTCGTAGAGAATGATCTTCAGCCATTTTTTGTTCTTCACAAAGCTTCATCCCGGAGAAAAGATAGAACACCAGCAGCACAGGGAAAATTGGGCAAGAGAAATGAGTTATCTTCATCATCACCGCAAGGTGCAAAGAAGCTTGGAGGAAGTATGACTGAAGAATGTGATCTTCATTTGTTTAAGCAACTGCAGATGGAAGCTTTTGACATTGTTTGGGCAAAGATTGAATCTACCATTAAGGATGTTTTAAGAGATCTCAATGCTATTGTATTTAATGATATACAAAAATGGGTTCTGGAGTGCTTCAACGCTACTAAGTTGCGTGGAGAACCTACTGTTGCTGAAGCAACTCGGTCTTTTCCCATTCTGAATAATATTACTCCTGGGCATCTGTTCACGGCTTTCGTTACTACCAGTAAGTGTTTTCACATTTCTGGTGAATCCATTCCGCTGAATGCTTTGATTCTTGAAAACTGGTTCGTTGATGATATATTGACATTTGAAGAGCTTGGCCACTTCTTGAAATCCCATGGATGCCATGTGGCTAAGCTTTCATCACTGGAGTTTTCATCAAAAAATGGGATTGCTGGTTGCTTGAAAGCTTTATTGCGAGAGTTTCTAGGGTTTGCTATTGATGTGGGTGCTTCTCAGTCAGCTGATATATCAATCTTAGCATCATGGTATAGAGAACAAGTCAACTACAATAAACCATTGTTGCTGATCGTTAATGATTTGGAGAGATGTTGTGGATCAGTTTTAGCTGATTTTATCTTGATGTTGAGTGAATGGGTTGTCAAGGTACCAATCATCTTCATATTTGGAGTTGCAACGACAGTGGATGCCCCCAGAAACATTCTGCCATCACATGCTCTTGAGCGTTTGTGTTTCTCGAGTTTTATGCTTGGAACACCAGCTGAGAGAATGGATGCAATTGTTGAGGCTGTTCTTGTGAAACATTGCACCACGTTTAGCATTGGTCATAAAGTGGCAGTCTTCTTGAGAAACTACTTCATTAATCAGGATGGGACAGTGACATCCTTTATTAGAGCTTTGAAGGTAGCTTGCTTATTACATTTCTCAATGGAACCTCTAAGTGTCATACATGGGCAAACGCTTGCTGAAGATCAGAAAGAAGGAAAATCTGCACTTTCACCTGAGACTCTGTTGAAATACATTGATGAACTTCCATTGTATGCCAGGAATCAAATGGTTGATCATCAGACTCAAAAAAGCATGGCTGAGGGTTTGTCAGAATTGGTGGCGATGCAGAAGCTATGGAGCACTGCAGTTCTGTGCCTATTTGAAGCTGGAAAATATATCAAAGTGCAACTATTGGATTTGTTTTGTGAAATTCTCAGTCAAGATTTGTACCTGTCAAGGGTTTCTGATTGTCATGTGGGGGGTGAAAAAGATCGTGGTTTGTCCTCAACAAATGATCCCAGTCAACAATATTCCATCAACAAAAGCGGTGGTTTTGTTGGCAAGATAGTACACAGAGTGAGTGATCTCCCTACAGGGATGCTATATCAATTGATTGAGAGTTGGGAAAAACTTACTGCAGATACTTCAGAGATTCGTGAGAAATTGAAAATGTTGCAATCTTCGGTAAGATGTGAAGATGGAAAACGTAAGAGTTCCAAGGACAATTCCAAGAGCTACAAGGATGCGAGAATGTTAAATTCACAAGCTGTCGCATTTTTAGATTGTCTACTTAGAAATTTTTTGAAGCCCATTGAAGGCATGCCTTTCCATGAAATTTTTTGCTTCAAGAATGTTGAGAAGCTTCAATTGGTTTTGATTGGAGATCCAAGAAGAAGAATTCAAGTTGATTTATTGGAGTTCCATAAGATTTTAAGGTGCAGTTGCTGTAGCAAGAGTGGCAATACCCTATTGCCATCCAGGCATGATTCCTCAATTATGTATTCTCTGGCTCAAGAGCATGGAGATCTTATCAATCTTCATGACTGGTTCCAGTCTTTCAGAACAATTGTTTGTCAACATAAAAATAAACGGAAACAAAATTCAAAGCAGTCCCCCTCATCAAAGAAGAGAAAAGATATAAATGGATCTGCAGACCAAAACGAAGCATCGATTCACAAGAGACGCTCGGACTTTGCTCAAAGAGTAGCATTTGGAATTTGA 2196 0.4003 MAPTRNVADSTPPSTTPEVVENDLQPFFVLHKASSRRKDRTPAAQGKLGKRNELSSSSPQGAKKLGGSMTEECDLHLFKQLQMEAFDIVWAKIESTIKDVLRDLNAIVFNDIQKWVLECFNATKLRGEPTVAEATRSFPILNNITPGHLFTAFVTTSKCFHISGESIPLNALILENWFVDDILTFEELGHFLKSHGCHVAKLSSLEFSSKNGIAGCLKALLREFLGFAIDVGASQSADISILASWYREQVNYNKPLLLIVNDLERCCGSVLADFILMLSEWVVKVPIIFIFGVATTVDAPRNILPSHALERLCFSSFMLGTPAERMDAIVEAVLVKHCTTFSIGHKVAVFLRNYFINQDGTVTSFIRALKVACLLHFSMEPLSVIHGQTLAEDQKEGKSALSPETLLKYIDELPLYARNQMVDHQTQKSMAEGLSELVAMQKLWSTAVLCLFEAGKYIKVQLLDLFCEILSQDLYLSRVSDCHVGGEKDRGLSSTNDPSQQYSINKSGGFVGKIVHRVSDLPTGMLYQLIESWEKLTADTSEIREKLKMLQSSVRCEDGKRKSSKDNSKSYKDARMLNSQAVAFLDCLLRNFLKPIEGMPFHEIFCFKNVEKLQLVLIGDPRRRIQVDLLEFHKILRCSCCSKSGNTLLPSRHDSSIMYSLAQEHGDLINLHDWFQSFRTIVCQHKNKRKQNSKQSPSSKKRKDINGSADQNEASIHKRRSDFAQRVAFGI 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0143 731 MobiDBLite consensus disorder prediction 1 67 - -
Aed5g0143 731 Pfam Origin recognition complex winged helix C-terminal 622 713 IPR040855 -
Aed5g0143 731 MobiDBLite consensus disorder prediction 1 21 - -
Aed5g0143 731 MobiDBLite consensus disorder prediction 697 717 - -
Aed5g0143 731 MobiDBLite consensus disorder prediction 32 46 - -
Aed5g0143 731 MobiDBLite consensus disorder prediction 686 717 - -
Aed5g0143 731 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 248 385 IPR045667 -
Aed5g0143 731 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 21 719 IPR020795 GO:0003677|GO:0005664|GO:0006260
Aed5g0143 731 MobiDBLite consensus disorder prediction 50 64 - -
Aed5g0143 731 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 21 719 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0143 1 705 Core DNA Replication Machinery Family AT5G16690 44.690 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0143 K02605 - gmx:100780646 1211.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0143 5 1059519 1071845 Aed5g0143 5 1059519 1071845 ECH