Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0122 ATGGCTCCATCTTCCGTCACTGTCACTTCCCGTTTTCATGAATCCGTCACCCGCAATGCATTTCGCTCCTATTTCTCTGAGTTTATCTCCACTTTCTTCTATGTCTTTCTTGTCGTTGGCGCTGGAATGTCCTCTCGGAAGTTGATGCCTGATGCTTCGTTGAACCCAACAAGTGTGGTGGTGGTTGGGATTGCAAGTGCTTTTGCACTGTCTTCAGTTCTGTACATCGCATGGGACATCTCAAGTGGACACGTGAATCCGGCGGTGACATTTGCAATGGCAGTGGGAGGCCACATTAGTGTACCAACCGCTCTCTTTTACTGGCTTGCTCAACTCATAGCCTCTGTTATGGCTTGCCTTGTTCTAAGGGTCATTGTTGTTGGAATGCATGTTCCAACATACACGATTGCGGAAGAGATGACAGGGTTTGGAGCATCGGTGTTAGAGGGAATTCTGACATTTGTATTGGTGTACACAGTGTATGCAGCGAGGGACCCAAGGCGTGGTCCAATGGGAATACTTGTAGTTGGACTAATGGCTGGGGCAAGTGTGTTAGCCGCAGCTCCATTCTCTGGCGGCTCAATCAACCCAGCCTGTGCTTTTGGCTCGGCTGCCATTTCTGGCTCTTTCAGGAACCAAGCTGTCTATTGGGTTGGACCCTTGATTGGTGCTACCATTGCTGGCCTTCTTTATGACAATGTCCTCTTCCGTTCTCAACCCACTAATTCTCAAGGAGTTATTATTGGGGTCTAA 753 0.4874 MAPSSVTVTSRFHESVTRNAFRSYFSEFISTFFYVFLVVGAGMSSRKLMPDASLNPTSVVVVGIASAFALSSVLYIAWDISSGHVNPAVTFAMAVGGHISVPTALFYWLAQLIASVMACLVLRVIVVGMHVPTYTIAEEMTGFGASVLEGILTFVLVYTVYAARDPRRGPMGILVVGLMAGASVLAAAPFSGGSINPACAFGSAAISGSFRNQAVYWVGPLIGATIAGLLYDNVLFRSQPTNSQGVIIGV 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0122 250 ProSitePatterns MIP family signature. 84 92 IPR022357 -
Aed5g0122 250 PRINTS Major intrinsic protein family signature 103 122 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed5g0122 250 PRINTS Major intrinsic protein family signature 148 166 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed5g0122 250 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed5g0122 250 PRINTS Major intrinsic protein family signature 22 41 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed5g0122 250 PRINTS Major intrinsic protein family signature 177 199 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed5g0122 250 PRINTS Major intrinsic protein family signature 66 90 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed5g0122 250 Pfam Major intrinsic protein 18 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed5g0122 250 PANTHER AQUAPORIN TIP5-1-RELATED 7 243 - -
Aed5g0122 250 Gene3D Glycerol uptake facilitator protein. 5 245 IPR023271 -
Aed5g0122 250 PANTHER AQUAPORIN-8 7 243 IPR034294 -
Aed5g0122 250 SUPERFAMILY Aquaporin-like 12 241 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0122 Aed-Chr5 921412 922660 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0122 1 250 Major Intrinsic Protein MIP AT3G47440 61.569 5.90e-103 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0122 K09873 - gmx:100801448 445.277