Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0120 ATGATAAACTGGGATGATCACGTTGACGAGGGTATACGCCTAATAAATATTCTTAAAGAGTGTGTGACACTTACTGAATCAGGAAACTTCAGTGGTGCAGATACTGCACTCTACCATCTCTCTCTCCTTGCTTCTCCTGATGGTGATTCTATGCAACGCGTTGCCACTTATTTCATTGAGGCACTTTCCTTTTGTCTAGTGGCCAAAAACATGCGTGGTGTACCCAGAGTTCTCCATTTGGCAAAAACACTATCAACTCCTGAACAACAATTAGTCAAGCAACTATTCGTTGATCTCTTTCCCTTCATAAAGATCGCACTCACCATCACAAATCAGGCCATTATCGAAGCCATGCAAGGAGAAACAACAATTAATGTCCTTGATCTTAGTCCATCCAACAGTGCTCTTCAGTGGACTAATCTCATGCATGCTTTAAAACAACGCACACCATATTTGAAAATCACTGTCACAGCCGTACACGAGAATAAAGAGGTACTAGACCAATTGGGGTTGGATCTTGGAGTTGAAGCTAAAAACTTGCATTTCCCTTTCCAATTCAACCCTGTTGTAAGCAGTTTGGAGAACCTTGACCCTGAGACACTGCCTATCAAGAAAGGTGAGCCTCTTGCAATTAGTTCTGTGCTTCAGCTTCACTCTCTTCTCGCCACTGATACTGATGATGATGAGATGGTCAAAATGAGGGGTAGTGGTCAAAGGATTTTTGCTGAGATGCTTGCCAAACCGAAAAACAAAAATGTGAATCCAAGTCCGGATTCTGCACTCTCACCTTTCTCTCCATATCCATCACATAAGATGGAGTGTTTTCTAAATGGCCTGTGGAAGCTCCAACCCAAAGTGATGGTTGTGACAGAGCAAGAGTCAAATGTTAACAATGGAACTAGTTTGACAGAGAGGGTGACAAGTGCTTTGATGTTTTACAGTACACTGTTTGATTGCTTGGAAGCTTCCAAGTCCAGAACATCAAAAGAGAGAAGCTTAATGGAGAAGATGCTGCTTGGGGAAGAGATAAGGAACATTGTTGCGTGTGAAGGAAGTGACAGAAAGGAGAGACATGAGACACTTGAGACATGGATCCCAAGGATTGAATTGGCTGGATTTGGGAGGGTACCTATCAGCTCCAATGGGATAAGGCTGGCAATAAAACTGTTGCAAAGCTATGTACCTGGCTACCACATCCATCAGAACAACAAGTGTTTGTTTATCTATTGGCACAAAATTCCTCTCTTTTCAGTTTCTGCATGGAAGTTTTAG 1272 0.4245 MINWDDHVDEGIRLINILKECVTLTESGNFSGADTALYHLSLLASPDGDSMQRVATYFIEALSFCLVAKNMRGVPRVLHLAKTLSTPEQQLVKQLFVDLFPFIKIALTITNQAIIEAMQGETTINVLDLSPSNSALQWTNLMHALKQRTPYLKITVTAVHENKEVLDQLGLDLGVEAKNLHFPFQFNPVVSSLENLDPETLPIKKGEPLAISSVLQLHSLLATDTDDDEMVKMRGSGQRIFAEMLAKPKNKNVNPSPDSALSPFSPYPSHKMECFLNGLWKLQPKVMVVTEQESNVNNGTSLTERVTSALMFYSTLFDCLEASKSRTSKERSLMEKMLLGEEIRNIVACEGSDRKERHETLETWIPRIELAGFGRVPISSNGIRLAIKLLQSYVPGYHIHQNNKCLFIYWHKIPLFSVSAWKF 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0120 423 ProSiteProfiles GRAS family profile. 5 422 IPR005202 -
Aed5g0120 423 Pfam GRAS domain family 15 422 IPR005202 -
Aed5g0120 423 PANTHER TRANSCRIPTION FACTOR GRAS, SCARECROW-LIKE PROTEIN 3-RELATED 11 422 - -
Aed5g0120 423 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 11 422 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0120 Aed-Chr5 912478 913749 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0120 9 422 GRAS Transcription Factor Family AT1G50420 44.622 6.40e-111 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aed5g0120 GRAS 1e-96 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0120 - - gmx:100801980 573.548