Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0115 CGGGACCGAGTTTTTGACGCGAAAAAAATCTTCCGAGAAATTCGACAAAGATATTATTATTATTCTAGGGGTAACAAACAACCTACGAGTGCGATCGAGATGATGGAGGATTCATGCGAGTTGTGCGAGAAGACGGCGATGATGCTCTGCGAGTCGGACCAGGCAAAGCTATGCTGGGAGTGCGACGAGAAAGTTCACAGCGCGAATTTCCTGGTGGCTAAGCATTCGCGAGTCCTTTTGTGTCGTTTATGTCATTCCCCAACTCCCTGGAAGGCCTCCGGCACCAAACTCACACCCACCATGTCGTTTTGTCACCGTTGCGTCGTGGATCGACACACCAAGTTGCACCAATTTGTCAATAATAATAATGTCAATGTCGAGGATGCCGCCTATGACCATCATCATCTTTACGTTGATGTCGACGATGATGACGTGGATCAAGTGCGTGCGCATGTGCGTCCAACCTACTCTAGTTCTGCCACCTCACCCAGTGCTGTCGCCGGCGCCGCTTTACAATTCAAGCGATTAAGAAATAACTCTTTTTCTGTCGATTCCCATGATGGGACAGAGACTTCTTCATCTGAGATGCTTAGTGCTACATTGCCCAATGGTGATGAATCAACCTCAATGAGAGTATCGAAGAGGCATCGAGTTGATCAACCAAATCATTGA 672 0.4777 RDRVFDAKKIFREIRQRYYYYSRGNKQPTSAIEMMEDSCELCEKTAMMLCESDQAKLCWECDEKVHSANFLVAKHSRVLLCRLCHSPTPWKASGTKLTPTMSFCHRCVVDRHTKLHQFVNNNNVNVEDAAYDHHHLYVDVDDDDVDQVRAHVRPTYSSSATSPSAVAGAALQFKRLRNNSFSVDSHDGTETSSSEMLSATLPNGDESTSMRVSKRHRVDQPNH 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0115 223 CDD Bbox1_BBX-like 39 80 - -
Aed5g0115 223 ProSiteProfiles Zinc finger B-box type profile. 39 80 IPR000315 GO:0008270
Aed5g0115 223 SMART bboxneu5 34 80 IPR000315 GO:0008270
Aed5g0115 223 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 35 197 - -
Aed5g0115 223 MobiDBLite consensus disorder prediction 182 223 - -
Aed5g0115 223 MobiDBLite consensus disorder prediction 182 208 - -
Aed5g0115 223 PANTHER B-BOX TYPE ZINC FINGER PROTEIN 35 197 - -
Aed5g0115 223 MobiDBLite consensus disorder prediction 209 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0115 Aed-Chr5 854605 855619 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0115 35 109 C2C2-CO-like Transcription Factor Family AT4G27310 62.667 6.15e-30 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0115 - - gmx:102660179 223.016