Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0114 ATGGAGAAGTACCTGAGAGAAAACTTTAACGTACAGCCGAAGAACCCTTCCGAGTCGGCCCTTCTCCGATGGAGATCCGCCGTCTCCGTCGTGAAGAATCCCCGCCGCCGCTTCCGCATGGTGGCCAATCTCGCCCAACGCGCCGAGGCGGAACACAAGCGCCATAAGCTCCAGGAAAAGATACGGGTGGCTCTCTTTGTGCAGAAGGCAGCGTTGCATTTTATTACCGCTGGGAACCGTGGTAGTGGTAGTGGTGGTAATTCCATCATGAGCAAAGAGGTTGAGGAAGCAGGGTTTGGAATTGAGCCCGATGAATTAGCCTCCATTGTTCGAACCCATAACAACAAATGTTTAGATCTTCATGAAGGAATTGAAGGAGTAGCAAGAGCTGTTCGCGTGTCATTGAAAGACGGGGTTAACTCAGTCGATGTTCAGCACAGACAAAAAATCTACGGTTTGAACCGGCATGCCGAGAAGCCCCCTAGAAGCTTTTGGATGTTCGTTTGGGATGCAATGCAGGACTTAACTCTAATAATCCTCATGGCATGTGCTTTCATTTCAGTAGGTGTTGGAATCTTAACCGAAGGTTGGCCAAAAGGAATGTACGATGGAGTGGGAATCATACTATGTATCATTTTAGTGGTCTTGGTCACTTCAATCAGTGACTATAAACAGTCTTTGCAATTTAAGGATTTGGATAAAGAAAAGAAAAATGTGAGCATTCAAGTTACGAGAGACTGTAAAAGACAAAAGGTTTTAATACATGATGTAGTTGTAGGAGACATAGTCCACCTGTCAATAGGAGACATAGTTCCTGCAGATGGGTTATTCACATCGGGTTTCGGTTTAGCAGTAGACGAATCAAGTCTATCAGGTGAGAGTGAGGCTGTGAATATCGATCAAAACAAGCCTTATCTTCTATCGGGGACGTCGGTGCAAGATGGGTCTGCTAAGATGCTGGTCACATCCGTTGGGGTGAAGACTGAATGGGGAAGATTGATGAGTACTCTTAACGAAGGGGGAGACGATGAGACACCACTTCAGGTCAAACTAAATGGAGTTGCCACCATTATTGGAAAGATAGGATTGGGTTTTGCAATAGTCACGTTCATGGTTCTCACGGGAAGGTTTTTGTGGCTCAAAATTGCTCACCATCAGATCACTAAATGGTCCCTTAAAGATGCTTCCAGCCTTCTCAATTTCTTTGCCACTGCTGTCATTATAATAGTTGTGGCAGTTCCCGAGGGTCTTCCTCTGGCAGTCACACTAAGCCTTGCATTTGCAATGAAGAAATTGATGAATGACAAGGCACTTGTAAGGCACCTTTCTGCATGCGAGACCATGGGTTCAGCTGGTTGCATTTGCACTGATAAAACCGGGACTTTGACTACGAATCACATGGTTGTTGACAGAATATGGATTTGCGGACAAACTAAGGCCATTAAAATCGGCAACAGTGAAAATCTGTTTAAGTCCTCTATTTCTCAACAGATATTTGATCTCCTTTTGCAATCCATATTCCAGAATACTGGGTCGGAGATAGTCAAAGGGCAAGATGGTAGGAGCAACATCATGGGTACTCCCACAGAGTCCGCATTGCTGGAATTTGGCTTGCTTTTGGGAGGTGAGTCCAAGTTTTATAACGACAAGTATAAAATAGTGAAGGTTGAGCCTTTCAATTCAATCAGAAAAAAGATGTCAGTACTGGTGGATCTTCCAAATGGCACCAACAACAACAAGTATCGAGCTTTTTGCAAAGGAGCATCAGAAATAGTTCTCACAATGTGTGACAAAGTTGTCAATGCAGAGGGCAAAGCCGTCCATTTGAACGAACAACAAAGGAAAAGCACCACAGAAGTTATCAATGGTTTTGCTTCTGAGGCTCTGAGAACACTCTGCATTGCCTTCAAGGATATTGAAGAATCTTCTGGAAGTGATAGTATTCCCGAGGATGAGTACACGTTGATAGCCATCATTGGGATCAAGGATCCAGTGAGGCCTGGAGTAAAAGAAGCTGTTAAGACATGTTTAGAAGCTGGCATTGTCGTTAGAATGGTAACTGGTGACAACATAAATACTGCTATAGCAATAGCTAGAGAATGCGGCATACTGACGGATGGAATCGCAATAGAGGGACCAGATTTCAGGAACAAGAGCCCGGAAGAGTTGATGAACATAATACCAAAAATACAGGTAATGGCCCGATCCTTGCCTCTTGACAAGCACACGCTAGTGAAACATTTGAGGGATGATTTTAATGAGGTTGTGGCAGTAACCGGTGATGGGACCAATGATGCTCCAGCGTTGCATGAGGCTGATATTGGACTTGCCATGGGTATTGCAGGGACAGAGGTTGCAAAAGAGAACGCGGATGTGATTGTAATGGATGATAACTTCGCAACCATAGTAAATGTAACGAGATGGGGCCGTGCAGTTTATATCAATATACAAAAGTTTGTCCAGTTCCAGTTAACAGTTAATGTTGTAGCTCTCATGCTGAATTTTGTTTCAGCATGCGTGACAGGGTCTGCTCCTCTGACTGCTGTTCAAATGCTTTGGGTAAACATGATAATGGACACACTGGGGGCATTGGCACTGGCTACAGAACCTCCTCATGATGGACTGATGAAGATGCCACCGATTGGAAGGAGCGCCAAATTCATCACCAGGGTCATGTGGAGGAACATTATTGGTCAGAGCATATACCAGATTATAGTCCTTTTGGTTCTCAAATTTCGTGGGAAACAGATTCTGAATCTCAATGGACCTGATGAGGATGCTACCACCTTACTTCTGAATACGGTCATATTCAACACATTTGTATTTTGCCAGGTATTCAACGAGATAAACAGCCGTGACATGGAGAAGATAAATGTATTGGAAGGAATGTTGGGGAGTTGGGTATTTGGGATGGTGATGGTGGCAACGGTATGGTTTCAAGTGATGATAGTTGAATATATGGGTGCTTTTGCTCAAACAGTGCCACTGAGTCGAGGCTTGTGGTTAACAAGCGTGATGATTGGTGCGGTAAGTATAGTTGTAGGTGTTGTACTCAAGTGCATTCCAGTTCCATCCAGTAACTACGTCGCCACCCACCATCATCATGATGGCTACGAGGAACTTCCCACTGGACCAGACCTAGCATAG 3147 0.4452 MEKYLRENFNVQPKNPSESALLRWRSAVSVVKNPRRRFRMVANLAQRAEAEHKRHKLQEKIRVALFVQKAALHFITAGNRGSGSGGNSIMSKEVEEAGFGIEPDELASIVRTHNNKCLDLHEGIEGVARAVRVSLKDGVNSVDVQHRQKIYGLNRHAEKPPRSFWMFVWDAMQDLTLIILMACAFISVGVGILTEGWPKGMYDGVGIILCIILVVLVTSISDYKQSLQFKDLDKEKKNVSIQVTRDCKRQKVLIHDVVVGDIVHLSIGDIVPADGLFTSGFGLAVDESSLSGESEAVNIDQNKPYLLSGTSVQDGSAKMLVTSVGVKTEWGRLMSTLNEGGDDETPLQVKLNGVATIIGKIGLGFAIVTFMVLTGRFLWLKIAHHQITKWSLKDASSLLNFFATAVIIIVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSAGCICTDKTGTLTTNHMVVDRIWICGQTKAIKIGNSENLFKSSISQQIFDLLLQSIFQNTGSEIVKGQDGRSNIMGTPTESALLEFGLLLGGESKFYNDKYKIVKVEPFNSIRKKMSVLVDLPNGTNNNKYRAFCKGASEIVLTMCDKVVNAEGKAVHLNEQQRKSTTEVINGFASEALRTLCIAFKDIEESSGSDSIPEDEYTLIAIIGIKDPVRPGVKEAVKTCLEAGIVVRMVTGDNINTAIAIARECGILTDGIAIEGPDFRNKSPEELMNIIPKIQVMARSLPLDKHTLVKHLRDDFNEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKENADVIVMDDNFATIVNVTRWGRAVYINIQKFVQFQLTVNVVALMLNFVSACVTGSAPLTAVQMLWVNMIMDTLGALALATEPPHDGLMKMPPIGRSAKFITRVMWRNIIGQSIYQIIVLLVLKFRGKQILNLNGPDEDATTLLLNTVIFNTFVFCQVFNEINSRDMEKINVLEGMLGSWVFGMVMVATVWFQVMIVEYMGAFAQTVPLSRGLWLTSVMIGAVSIVVGVVLKCIPVPSSNYVATHHHHDGYEELPTGPDLA 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0114 1048 Pfam Cation transporting ATPase, C-terminus 844 1020 IPR006068 -
Aed5g0114 1048 Pfam E1-E2 ATPase 240 433 - -
Aed5g0114 1048 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 49 IPR024750 GO:0005516
Aed5g0114 1048 PRINTS H+-transporting ATPase (proton pump) signature 759 775 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aed5g0114 1048 PRINTS H+-transporting ATPase (proton pump) signature 791 816 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aed5g0114 1048 PRINTS H+-transporting ATPase (proton pump) signature 617 635 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aed5g0114 1048 SUPERFAMILY Calcium ATPase, transmembrane domain M 123 1023 IPR023298 -
Aed5g0114 1048 SUPERFAMILY Calcium ATPase, transduction domain A 240 336 IPR008250 -
Aed5g0114 1048 PANTHER CALCIUM-TRANSPORTING ATPASE 3 1031 - -
Aed5g0114 1048 SFLD Haloacid Dehalogenase 437 811 - -
Aed5g0114 1048 SUPERFAMILY HAD-like 454 864 IPR036412 -
Aed5g0114 1048 Gene3D - 138 338 - -
Aed5g0114 1048 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 116 1023 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Aed5g0114 1048 PRINTS P-type cation-transporting ATPase superfamily signature 455 469 - -
Aed5g0114 1048 PRINTS P-type cation-transporting ATPase superfamily signature 759 778 - -
Aed5g0114 1048 PRINTS P-type cation-transporting ATPase superfamily signature 657 668 - -
Aed5g0114 1048 PRINTS P-type cation-transporting ATPase superfamily signature 286 300 - -
Aed5g0114 1048 PRINTS P-type cation-transporting ATPase superfamily signature 679 689 - -
Aed5g0114 1048 PRINTS P-type cation-transporting ATPase superfamily signature 783 795 - -
Aed5g0114 1048 SMART Cation_ATPase_N_a_2 120 192 IPR004014 -
Aed5g0114 1048 ProSitePatterns E1-E2 ATPases phosphorylation site. 457 463 IPR018303 -
Aed5g0114 1048 Gene3D - 170 1021 - -
Aed5g0114 1048 SFLD p-type atpase 437 811 IPR044492 -
Aed5g0114 1048 CDD P-type_ATPase_Ca_PMCA-like 144 892 - -
Aed5g0114 1048 Gene3D - 452 804 IPR023214 -
Aed5g0114 1048 Pfam haloacid dehalogenase-like hydrolase 453 773 - -
Aed5g0114 1048 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 207 479 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aed5g0114 1048 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 724 846 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aed5g0114 1048 PANTHER CATION TRANSPORTING ATPASE 3 1031 - -
Aed5g0114 1048 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 461 669 IPR023299 GO:0000166
Aed5g0114 1048 Gene3D - 16 76 - -
Aed5g0114 1048 Gene3D - 465 664 IPR023299 GO:0000166
Aed5g0114 1048 Pfam Cation transporter/ATPase, N-terminus 123 187 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0114 Aed-Chr5 847539 851884 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0114 57 1045 Primary Pumps ATPases AT3G57330 68.081 0.0 1365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0114 K01537 - gmx:100801260 1812.35