Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0106 ATGGAGTACCTCTACCTTTCTTGCAGAGCCGAATCCGCGGTCTCAACCACCAATTCGGTGTCCTCCTCTTCCAAAGACAAAGAGAAAGAGAAAAGCAGCATCAAGATCCAAGAGTTTCAGTACAGTGACCTCGAAGCTGCCACCAATGGCTTCTCCGACCGCAAGCTCCTCGGCAAAGGAAGCCACGGCTATGTCTACAAAGCGGTGGTTCGGGGGCGTCCCGTGGCGGTGAAGCGTCCATCGCGGCTTCATCATCACGGCGGCGTTGTTCCCAGAGCAGTCTCCGAGATCACAAACGAGGTCGACAACGAGATCGACATCTTGTCCAAAATCCAGAGCCCGAGGTTGGTGAATTTGGTGGGTTTCACGAATGATTCAAGAGACAGGCTTTTGGTGGTGGAGTTCATGAGCAATGGCACCCTTTACGATGTTCTTCATTCCTCTCCAAGGCCTCCCAATTGGGGTAGGAGGATTCGTTTGGCTTTGCAAACTGCTAAAGCCATTGATACTCTTCACTCCTCAACCCCTCCTGTGATTCACCGTGATATCAAGTCTGCCAATGTTCTCATCGACCGCAGCTACAATGCAAGAATAGCGCCCCCAAAGGATCCGATTGTGAGGAAGCAGTTGGCCGTGATTGCAGCTAAGTGTGTGAGGTCTTGCAGGGAGAGAAGGCCCTCTATGAACGAGGTTGTTACCTGGCTTTGTGGCTTGTGTAAGTTCGTGCCTCTTCATTCCTGGAATGGTTTTAACAACCCCTGCATGATGGTTGAGACTGTGGGGCGCCCTGTTGAAGCACCAAGAAGTGCTCAATCCAGGACCGACAAGGTAATCTCACAAGATTGTGATGCATTTTTTAAGGAGGGACTTGTTCTGGAGGCACCAGAAAGGATTCAAACACGTTGGAGAGGAGAGCAACAAGATCAAAATTAG 933 0.507 MEYLYLSCRAESAVSTTNSVSSSSKDKEKEKSSIKIQEFQYSDLEAATNGFSDRKLLGKGSHGYVYKAVVRGRPVAVKRPSRLHHHGGVVPRAVSEITNEVDNEIDILSKIQSPRLVNLVGFTNDSRDRLLVVEFMSNGTLYDVLHSSPRPPNWGRRIRLALQTAKAIDTLHSSTPPVIHRDIKSANVLIDRSYNARIAPPKDPIVRKQLAVIAAKCVRSCRERRPSMNEVVTWLCGLCKFVPLHSWNGFNNPCMMVETVGRPVEAPRSAQSRTDKVISQDCDAFFKEGLVLEAPERIQTRWRGEQQDQN 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0106 310 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN 196 282 - -
Aed5g0106 310 PANTHER OS01G0750732 PROTEIN 196 282 - -
Aed5g0106 310 SUPERFAMILY Protein kinase-like (PK-like) 29 199 IPR011009 -
Aed5g0106 310 Gene3D Phosphorylase Kinase; domain 1 20 135 - -
Aed5g0106 310 PANTHER OS01G0750732 PROTEIN 5 198 - -
Aed5g0106 310 SMART serkin_6 51 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g0106 310 Gene3D Transferase(Phosphotransferase) domain 1 136 201 - -
Aed5g0106 310 Pfam Protein kinase domain 52 198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g0106 310 ProSiteProfiles Protein kinase domain profile. 51 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g0106 310 ProSitePatterns Protein kinases ATP-binding region signature. 57 78 IPR017441 GO:0005524
Aed5g0106 310 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN 5 198 - -
Aed5g0106 310 ProSitePatterns Serine/Threonine protein kinases active-site signature. 178 190 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0106 Aed-Chr5 800153 803272 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0106 1 199 Receptor kinase-like Gene Family AT3G59420 35.377 1.86e-34 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Aed5g0106 Pkinase 9.8e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0106 - - gmx:100805692 315.849