Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0088 ATGGAGGAAGTTCAGGAGTCTCAGACCCAATCATTGCTCGGCCAAGAAGATGAAAATGAAGTGATTACTGAGAGCTCAGCATTTGTTAAAGGGGAACCGGCACCAGAATTCAGCAGTAGCCCCCCAAAAGTTGATTCTGAAGTTGAGGTCCTTCACGAGAAGGTCACCAAGCAAATAATTAAGGAAGGCCATGGCCAGAAACCTTCCAAATATTCAACTTGCTTCTTCCATTACAGGGCATGGGCTGAGAACACACAACACAAGTTTGAAGATACATGGCTGGAGCAACGGCCAATTGAGATGGTCTTAGGAAAAGAAAAGAAAGAAATGGCTGGGTTGGGCATTGGTGTAGCAAGCATGAAAGCTGGGGAGCGTGCATTGGTGCATGTGGGCTGGGAATTAGGATATGGAGAAGAAGGAAGCTTTTCTTTTCCAAATGTTCCACCCAAGGCAGATTTAGTTTATGAACTTGAGCTCATTGGCTTTGATGAAACAAAAGAAGGGAAAGCTCGCAGTGATATGACTGTGGAGGAGAGGATTGGTGCAGCAGACCGGAGAAAGATGGATGGAAATGCTTTGTATCAGGAAGAAAAACTAGAGGAGGCTATGCAACAGTATGAAATGGCCATAGCATATATGGGAGATGACTTCATGTTCCAGTTGTTTGGGAAGTATAGAGATATGGCTCTAGCTGTAAAAAATCCATGCCATCTTAACATGGCAGCCTGTTTGATTAAGCTGAACCGCTTTGATGAAGCTATAGGACAATGCAGCATTGTACTGGGTGAGGATGAGAGCAATGTGAAGGCATTATTTAGGCGAGGTAAGGCTAGAGCAGCACTTGGGCAAACGGATGCTGCCAGGGAAGATTTTCTGAAGGCACGAAAATATGCCCCTCCTCAAGATAAAGCTATTGCTAAAGAATTGAGATTGCTTGCTGAACATGACAAGGCTGTTTACCAAAAGCAGAAAGAGATATATAAAGGAATTTTTGGACCAAGACCTCAACCACTTCCTAAGCCAACAAATTCGCTCTTACTTATTTGGCAGTGGTTTCTTTCAGTATTCTATGGTCTTCTCACCCTCTTCAAGCGTCAAACCCATAATAAATCTGACTAA 1119 0.4361 MEEVQESQTQSLLGQEDENEVITESSAFVKGEPAPEFSSSPPKVDSEVEVLHEKVTKQIIKEGHGQKPSKYSTCFFHYRAWAENTQHKFEDTWLEQRPIEMVLGKEKKEMAGLGIGVASMKAGERALVHVGWELGYGEEGSFSFPNVPPKADLVYELELIGFDETKEGKARSDMTVEERIGAADRRKMDGNALYQEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLIKLNRFDEAIGQCSIVLGEDESNVKALFRRGKARAALGQTDAAREDFLKARKYAPPQDKAIAKELRLLAEHDKAVYQKQKEIYKGIFGPRPQPLPKPTNSLLLIWQWFLSVFYGLLTLFKRQTHNKSD 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0088 372 Gene3D - 39 164 IPR046357 GO:0003755
Aed5g0088 372 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 71 163 IPR001179 GO:0003755
Aed5g0088 372 MobiDBLite consensus disorder prediction 1 46 - -
Aed5g0088 372 SUPERFAMILY FKBP-like 44 169 - -
Aed5g0088 372 SMART tpr_5 268 301 IPR019734 GO:0005515
Aed5g0088 372 SMART tpr_5 183 216 IPR019734 GO:0005515
Aed5g0088 372 SMART tpr_5 234 267 IPR019734 GO:0005515
Aed5g0088 372 MobiDBLite consensus disorder prediction 1 22 - -
Aed5g0088 372 SUPERFAMILY TPR-like 175 310 IPR011990 GO:0005515
Aed5g0088 372 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 67 160 IPR001179 GO:0003755
Aed5g0088 372 Gene3D Tetratricopeptide repeat domain 165 296 IPR011990 GO:0005515
Aed5g0088 372 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 32 332 - -
Aed5g0088 372 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP42-RELATED 32 332 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0088 54 331 Calmodulin-binding Proteins AT3G25230 30.822 2.67e-27 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0088 - - gmx:100790587 699.123