Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0049 ATGGAGGGAATTTCTTGGAAGCAGTTGATGACATCCCTTGTGATAATAATTATTGGTGGTTCTAGTTTGAGTATGAGCACAGTCGACGAAGAAGCGAACACGGTGTTCATAAGAACATCTTGCAGTTCCACAACATATCCAAGGCTCTGCTACAGCTCCTTAGTGAAGCATGCAGATTTGATCCAATCAAACCGTGCGGTTTTGACAGGAACAGCCCTGAATGTGACACTGGCATCAGCTAAGTCGACATCGGCAATGATGTCAACACTTGCAAAGAAGCAAGGGCTGAAGCCAAGAGAGGTTGCAGCAATGAAGGACTGCGTGGAGGAGCTGGCTGACTCTGTTGATGAACTCAGAAGGTCTATTGCTGAGATGGCTCATCTAAGTCCCTCCAATTTTGAGATGACAATCAACGACGTTCAGACGTGGGTCAGTTCTGCTTTGACGGATGAGACCACCTGCACCGATGGCTTCCAAGAAGAGACAGCCACTGGCGGCACTGCCACAAATGTCAAGACCACGGTCAGAAGCCAAATTGTGCAGGTGGCTCAGTTGACTAGTAATGCCTTGGCTTTGATAAATCAGCTAGCCAACTTCGTTTAA 603 0.4743 MEGISWKQLMTSLVIIIIGGSSLSMSTVDEEANTVFIRTSCSSTTYPRLCYSSLVKHADLIQSNRAVLTGTALNVTLASAKSTSAMMSTLAKKQGLKPREVAAMKDCVEELADSVDELRRSIAEMAHLSPSNFEMTINDVQTWVSSALTDETTCTDGFQEETATGGTATNVKTTVRSQIVQVAQLTSNALALINQLANFV 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0049 200 PANTHER 21 KDA PROTEIN-LIKE 27 198 - -
Aed5g0049 200 TIGRFAM PME_inhib: pectinesterase inhibitor domain 13 196 IPR006501 GO:0004857
Aed5g0049 200 Coils Coil 108 128 - -
Aed5g0049 200 SMART PMEI_2 32 192 IPR006501 GO:0004857
Aed5g0049 200 PANTHER PECTINESTERASE INHIBITOR-LIKE 27 198 - -
Aed5g0049 200 Gene3D Invertase/pectin methylesterase inhibitor family protein 32 198 IPR035513 -
Aed5g0049 200 Pfam Plant invertase/pectin methylesterase inhibitor 36 192 IPR006501 GO:0004857
Aed5g0049 200 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 36 197 IPR035513 -
Aed5g0049 200 CDD PMEI-like_3 39 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0049 Aed-Chr5 379345 379947 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0049 37 199 Carbohydrate Esterase AT3G14310 32.164 1.20e-22 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0049 - - gmx:100305537 290.812