Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0048 ATGGAAGCCCTTTCTTCTAAGCATGTTATGAGCATATCCTTTCTGATAATAATTGTTGCTGGTTCTATTTTGAGCTGCAGTGGCAAGGAATTAGCGAGTACGGTGTTCATAAGAACATCTTGCAGTTCCACAACATATCCAAGACTCTGCTACAGCTCCTTAGTGAGGCATGCAGAGTTGATCCAAACAAATCGCGTGGTTTTGACAGGCGCAGCCCTGAATGTGACACTTGCATCTGTGAAATCGACATCGGCAATGGTTTCAACACTTGCAGAAAAGACGAAGGGGCTGAAGCCAAGGGAAGTTGCAGCGATGAAGGACTGCGTGGAGCAGCTGAGTGAATCGGTGGATGAACTGAGAAGGTGTATTGCTGAGATGAGTGATCTAAGAGCCTCCAATTTTGAGACGACAATGAGTGATGTACAAACATGGGTGAGTGCTGCTTTGACTGATGAGACCACCTGCAACGATGGATTCCAAGAGATGACTACTACTGATTCAATTAATATTAAAACCACTGTGAGAAGACTCGTTCTGCAGGTAGCTCAATTGACTAGCAATGCCCTGGCTCTCATAAATCATCTAGCCAATTCTTAA 597 0.4456 MEALSSKHVMSISFLIIIVAGSILSCSGKELASTVFIRTSCSSTTYPRLCYSSLVRHAELIQTNRVVLTGAALNVTLASVKSTSAMVSTLAEKTKGLKPREVAAMKDCVEQLSESVDELRRCIAEMSDLRASNFETTMSDVQTWVSAALTDETTCNDGFQEMTTTDSINIKTTVRRLVLQVAQLTSNALALINHLANS 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0048 198 PANTHER PECTINESTERASE INHIBITOR-LIKE 25 195 - -
Aed5g0048 198 Gene3D Invertase/pectin methylesterase inhibitor family protein 32 197 IPR035513 -
Aed5g0048 198 Pfam Plant invertase/pectin methylesterase inhibitor 36 191 IPR006501 GO:0004857
Aed5g0048 198 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Aed5g0048 198 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 36 195 IPR035513 -
Aed5g0048 198 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 195 IPR006501 GO:0004857
Aed5g0048 198 CDD PMEI-like_3 39 197 - -
Aed5g0048 198 PANTHER 21 KDA PROTEIN-LIKE 25 195 - -
Aed5g0048 198 Coils Coil 109 129 - -
Aed5g0048 198 SMART PMEI_2 32 191 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0048 Aed-Chr5 375624 376220 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0048 33 195 Carbohydrate Esterase AT1G53830 33.929 3.09e-22 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0048 - - gmx:100802601 281.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0048 5 375624 376220 Aed5g0048 5 375624 376220 ECH