Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0047 ATGGCATTGCACGCTCTCTTTAGATCAATACTTGTATCCCTTCTACTCATCTCAACCCTTCTCGAATTAGCAACATCTGCCACGTCCACAGATTCCCTCAAAGCATACAAAAAGTTCATAAAAGACAAGTGCAATTCAACAACTACTTACCCAAAAGTTTGCTACAAGTCCCTATCCCATTATGCGTCAAAAATAAAAAGAAACCGCGTGACACTGACCAAGGTGTCTATTTATGTGGCTCTAAAAGCAGCAAAGAGTGCATATAGCACATTGACAAAGCTATCGAATTCCAAGGGGAAGCTAACACGTGGAGAAACGCTGGTGATTGCTGATTGCAGAGAGAACATTGATGACACATTGGATCTGCTTCAGCAATCTTCAGATGGGTTAGCACATTTGAATGGCACATCTACTACTGATGAGAAATTTCAATGGGACAACATTAAGACATGGATTAGTTCTGCCATAACAGATGAGGCTACATGCACCGATGAGTTTGACGAAATACAAGTGCGTCCTTCGCTGCAGAACAAGATCAAAACCACCGTTTTTAACGTTTCTTGGCTCACTAGCAATGCCTTGGCATTTCTCAACACCCTTTACTAA 606 0.4158 MALHALFRSILVSLLLISTLLELATSATSTDSLKAYKKFIKDKCNSTTTYPKVCYKSLSHYASKIKRNRVTLTKVSIYVALKAAKSAYSTLTKLSNSKGKLTRGETLVIADCRENIDDTLDLLQQSSDGLAHLNGTSTTDEKFQWDNIKTWISSAITDEATCTDEFDEIQVRPSLQNKIKTTVFNVSWLTSNALAFLNTLY 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0047 201 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 200 IPR035513 -
Aed5g0047 201 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 4 201 - -
Aed5g0047 201 SMART PMEI_2 35 196 IPR006501 GO:0004857
Aed5g0047 201 Pfam Plant invertase/pectin methylesterase inhibitor 38 195 IPR006501 GO:0004857
Aed5g0047 201 TIGRFAM PME_inhib: pectinesterase inhibitor domain 15 200 IPR006501 GO:0004857
Aed5g0047 201 PANTHER PECTINESTERASE INHIBITOR-LIKE 4 201 - -
Aed5g0047 201 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 200 IPR035513 -
Aed5g0047 201 CDD PMEI-like_3 44 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0047 Aed-Chr5 372166 372771 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0047 40 200 Carbohydrate Esterase AT1G53830 31.515 3.08e-13 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0047 - - gmx:100776299 290.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0047 5 372166 372771 Aed5g0047 5 372166 372771 ECH