Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0044 ATGTCGATGTCGTCCACCACTCCGCTGAAACCCGAGCGAGGCGATGGGACACCGTCGTCATCGGTCGGCAGAAGTAAGCTTCAGAAGATTCCGCCGATACCGATTCGACGAAGTACGGTAACAACAGATGCAGGTGGCGATGAAGAGGAAGGTGTATCTTCTTCCATATTGCTGGCGTCGTCTCTGGGGCTGAATCACATTCGAACGCGTTCTTCGTCTTCTCCTCTTCGCTATTCCTCCTCCCTTGGTGCACCTTCCATCTTCACACAGGAATCTGTCACTATTAATGACGCCAGACTTAGATCCAAACCCAATTCCCTTCCTAGAAAAGACCCAGGGGGAAATGTTCATTTGATTCAATCCCAATCGCTGAGAACTCATTCGCAACTTATTCCTGTGCTGGAGGGTCATCATGCTGCTTTCACCAAAGAAATGCAATCCCCACGTTTTCAGGAAATCCTGCGACTGACCAGTGGACGCAAAAAGAGAAACCCTGATATTAAAAGCTTTTCCCATGAATTCAACTCCAAAGGAGTTAGACCATTTCCAACCTGGAGACATCGTGCCTTTGGCCACATGGAGGAAATCTTGGCGGCAATTAGAGCCAAGTTTGAAAAATTAAAGCAAGAAGTTGATTCTGACTTGGGTGGTTTTGCTGGAGATTTGGTGGGCATTCTTGAAAAAAATTTAGTGTCTGATCGTCAATGGAAAGAGAAGTTGGAGGATCTGTTGGTTATTACTCAACAATGTGCAAGGATGACTCCTACCCAGTTTTGGATCAAATGCGAATCCATTGTTCAAAATCTAGATGACAAACGTCAAGAATTACAAGTCGGGATACTCAAGCAAGCTCATACACGCCTACTGTTTATTCTCACTCGTTGCACTCGCCTAGTGCAATTCCAGAAGGAAAGCGGATATGAACAAGATCACGTTCTGGGTCTTCACCAACTCAGCGATCTTGGGGTCTATCCTGAGCACATTTTGAAGGCTCCACAGCAGAAATCCAGTATTCCACCTCCTCCTGGACATGATATGCCTGAGAAACAGTTAAAGAAGTCACAATCACATGGTAAAGAGAAAGACAAGCTGATTACAAACCAAACTCAAGCTGACCAACATGTAACTAGTGTTAGTGTTGCGATTGACAATGTGGAGGTTGCTACAGACAAAAGTGTTGAATCAACTCCTAGCAGTTATAGGATGTCTTCTTGGAGAAAGCTTCCATCTGCTGCAGAGAAAAAGCGAAAAGATCAAGATGCTGTAAGTGAACTGGATCACTTGCTGGTCAAAGATGAACATTCTGAAACTTTGGATACTTCCTCGTGTCATCATCCTGAACATTCACAATCATCATCCAGAGCGCAAAAGGTTTCTTGGGGATTCTGGGGAGATCAGCAAAATCTAACATACGAGGATTCAATGATATGCAGGATTTGTGAGGTTGAAATACCAATTGTACATGTGGAGGAGCATTCTCGAATATGCACAATTGCTGATAGATGTGATTTAAAAGGCTTAACTGTAAATGAACGCCTTGAAAGAGTTTCTGAAACCATTGAAAGGATACTGGAATCCTGGACACCAAAAAGCACACCAAAAAGTGCTGATACTCCCGGAGAAAGTTTCGAGCTTGCCACAGTGTCAACATCAAGTGTGCATGAAGAGTTCAATGATTTGTCTCTAGAGAGAAATAACCTGACTTGTAGATTCTCTGAAGACTTGCTTGACTCTGCTGCAGAGCCTGACAATACTTTTGTCATGGAGGATCTTAACCTCTCACCCAGAATATCATGTGAAGCACGCATCTGCTTAAAACCTGATCATGGAACAAAGGTATCATCAGCTGGAAGCTTGACACCGAGATCACCGTTGGTAACACCACGAACCACACAGATAGAAATGTTACTAAGTGGACGAAGAACACTATCTGAGCTTGAAAGTTGTGAACAGATAAGCAAGCTAGTTGAATTAGCCCGTGCTGTTGCAAATGTGAACAACTGTGACTACAGTGCTCTGGAGTATATGCTTGAGCGCTTAGATGACCTGAAATACGCCATTCAAGACAGAAAAGTGGATGCACTTATTGTGGAGACTTTTGGACGACGAATAGAGAAGCTTTTGCTGGAGAAATATATATCTCTTTGTGGGCAGATAGAAGATGAAAAGCTGGACTCATCCAATAGCATGGCTGATGAAGAGAGTTCAGTGGAAGATGATACAGTTCGTAGCCTTCGTGCTAGCCCTATTAATGCCTGTTCCAAGGACCGAACCTCTATTGAAGACTTTGAAATAATAAAACCAATAAGTAGGGGGGCATTTGGACGAGTTTTTCTTACCCGGAAAAGAGCAACTGGTGATTTATTTGCCATAAAGGTTCTGAAAAAGGCAGATATGATTCGTAAAAATGCAGTTCAAAGTATTTTGGCAGAGCGAGACATCCTTATATCTGTACGGAACCCTTTTGTGGTCCGATTTTTCTACTCTTTCACATGTAGGGAAAATCTTTATCTAGTTATGGAGTATTTGAATGGTGGAGATCTTTATTCTATGCTGAGAAATCTAGGTTGCTTAGATGAAGATATGGCTCGTGTATATATGGCAGAAGTTGTTCTTGCATTGGAGTATTTGCATTCCTTAAATGTGATTCACAGAGACTTGAAGCCAGATAACTTACTGATTGGTCAATATGGTCATATTAAGTTGACAGATTTTGGGCTCTCTAAGGTTGGTCTTATCAACAGCACAGATGATTTATCAGCGCCATCATTTTCCACCAATGGTTTCCTAGGAGATGATGAAACACAACCTCGACATTCTTCAAAACGGGAAGAGCGTCAAAAACAATCAGTGGTTGGCACCCCGGATTATTTGGCACCTGAAATACTTCTTGGCATGGGACATGGTGCAACTGCAGATTGGTGGTCCGTGGGTGTCATACTTTATGAGCTTCTTGTGGGTATTCCACCATTTAATGCAGAACATCCACAGCAAATTTTTGATAACATAATTAACAGAGACATACAATGGCCCAAGGTTCCTGAGGAACTCAGCTCTGAAGCATATGATTTGATAAATAAATTATTGAACGAAAATCCAGTCCAAAGATTAGGTGCAACAGGAGCTACAGAAGCTACGTTCATTCCATCGGCTGAAGCTCTTGATACAAGTTATTTTATGAGCCGATACATTTGGAATCCTGAGGATGAACATTGTCTTGGAGGTAGTGATTTTGATGAGATTACTGAAACATGCAGCAGCGGTTCAGGCAGTGATTTATTAGATGAAGATGGCGATGAATGTGGTAGTTTAGCAGAGTTCAATGGTCCACCTCTTGAAGTGCAGTACTCATTTAGTAATTTCTCATTTAAGGAACCTTCTAAACACTATGCTTCGCTTTCCCAAACTGGATTCCCTTCCCAGGAAACGGCTGGGATTTCCCCCAAACCGCTTATAACCTTTGTTTTAGGAGGCCCTGGTAGTGGAAAAGGTACACAATGTGCAAAAATTGTTGAAACCTTTGGATTTAAGCATCTGAGTGCTGGAGATCTTTTGAGAAGGGAGATGGTTTCTGATAATGAATATGGCTCAATGATTCTGAATACAATTAGAGAAGGAAGAATTGTTCCATCAGAAGTGACTGTCAAATTGATTCTAAGAGAGATGGAATCTAGTGACAATAATAAGTTTCTTATTGATGGTTTCCCTAGAAGTGAGGAGAATCGCATAGCTTTTGAACAAATTATTGGAGCAGAACCACATATGGTACTTTTCTTTGATTGTCCTGAAGAAGAAATGGTGAAACGTGTGCTGAGCCGTAATCAGGGTCGAATTGATGACAACATAGATACAGTCAAGAACCGTCTTAAAGTATTTGAGTCATTAAATCTTCCTGTGGTTAACTATTATGCTAAGAAAGGGAAACTTTACAAGATCAATGCGGTGGGAACAGTAGATGAAATATTTGAGCATGTTCGGCCAGTTTTTGAGGCATTTTTAACTTTTAGGTGGGCAATAGCTCTAAATAATGACTTGCATCATTCTATGCAGCATGAGGCTAAATGA 4065 0.4175 MSMSSTTPLKPERGDGTPSSSVGRSKLQKIPPIPIRRSTVTTDAGGDEEEGVSSSILLASSLGLNHIRTRSSSSPLRYSSSLGAPSIFTQESVTINDARLRSKPNSLPRKDPGGNVHLIQSQSLRTHSQLIPVLEGHHAAFTKEMQSPRFQEILRLTSGRKKRNPDIKSFSHEFNSKGVRPFPTWRHRAFGHMEEILAAIRAKFEKLKQEVDSDLGGFAGDLVGILEKNLVSDRQWKEKLEDLLVITQQCARMTPTQFWIKCESIVQNLDDKRQELQVGILKQAHTRLLFILTRCTRLVQFQKESGYEQDHVLGLHQLSDLGVYPEHILKAPQQKSSIPPPPGHDMPEKQLKKSQSHGKEKDKLITNQTQADQHVTSVSVAIDNVEVATDKSVESTPSSYRMSSWRKLPSAAEKKRKDQDAVSELDHLLVKDEHSETLDTSSCHHPEHSQSSSRAQKVSWGFWGDQQNLTYEDSMICRICEVEIPIVHVEEHSRICTIADRCDLKGLTVNERLERVSETIERILESWTPKSTPKSADTPGESFELATVSTSSVHEEFNDLSLERNNLTCRFSEDLLDSAAEPDNTFVMEDLNLSPRISCEARICLKPDHGTKVSSAGSLTPRSPLVTPRTTQIEMLLSGRRTLSELESCEQISKLVELARAVANVNNCDYSALEYMLERLDDLKYAIQDRKVDALIVETFGRRIEKLLLEKYISLCGQIEDEKLDSSNSMADEESSVEDDTVRSLRASPINACSKDRTSIEDFEIIKPISRGAFGRVFLTRKRATGDLFAIKVLKKADMIRKNAVQSILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSMLRNLGCLDEDMARVYMAEVVLALEYLHSLNVIHRDLKPDNLLIGQYGHIKLTDFGLSKVGLINSTDDLSAPSFSTNGFLGDDETQPRHSSKREERQKQSVVGTPDYLAPEILLGMGHGATADWWSVGVILYELLVGIPPFNAEHPQQIFDNIINRDIQWPKVPEELSSEAYDLINKLLNENPVQRLGATGATEATFIPSAEALDTSYFMSRYIWNPEDEHCLGGSDFDEITETCSSGSGSDLLDEDGDECGSLAEFNGPPLEVQYSFSNFSFKEPSKHYASLSQTGFPSQETAGISPKPLITFVLGGPGSGKGTQCAKIVETFGFKHLSAGDLLRREMVSDNEYGSMILNTIREGRIVPSEVTVKLILREMESSDNNKFLIDGFPRSEENRIAFEQIIGAEPHMVLFFDCPEEEMVKRVLSRNQGRIDDNIDTVKNRLKVFESLNLPVVNYYAKKGKLYKINAVGTVDEIFEHVRPVFEAFLTFRWAIALNNDLHHSMQHEAK 1354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0044 1354 ProSitePatterns Serine/Threonine protein kinases active-site signature. 882 894 IPR008271 GO:0004672|GO:0006468
Aed5g0044 1354 ProSiteProfiles Protein kinase domain profile. 763 1048 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g0044 1354 SUPERFAMILY Protein kinase-like (PK-like) 760 1090 IPR011009 -
Aed5g0044 1354 Pfam Protein kinase domain 763 1047 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g0044 1354 SMART serkin_6 763 1048 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g0044 1354 TIGRFAM UMP_CMP_kin_fam: UMP-CMP kinase family 1152 1329 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
Aed5g0044 1354 Gene3D Transferase(Phosphotransferase) domain 1 847 1044 - -
Aed5g0044 1354 MobiDBLite consensus disorder prediction 390 405 - -
Aed5g0044 1354 Gene3D - 1147 1331 IPR027417 -
Aed5g0044 1354 MobiDBLite consensus disorder prediction 333 370 - -
Aed5g0044 1354 ProSitePatterns Adenylate kinase signature. 1230 1241 IPR033690 -
Aed5g0044 1354 CDD STKc_MAST_like 769 1044 - -
Aed5g0044 1354 MobiDBLite consensus disorder prediction 390 420 - -
Aed5g0044 1354 Hamap UMP-CMP kinase [CMPK1]. 1150 1332 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
Aed5g0044 1354 MobiDBLite consensus disorder prediction 436 456 - -
Aed5g0044 1354 MobiDBLite consensus disorder prediction 924 951 - -
Aed5g0044 1354 Pfam Adenylate kinase 1155 1307 - -
Aed5g0044 1354 MobiDBLite consensus disorder prediction 1 51 - -
Aed5g0044 1354 PANTHER SERINE/THREONINE-PROTEIN KINASE 22 1128 - -
Aed5g0044 1354 MobiDBLite consensus disorder prediction 1 26 - -
Aed5g0044 1354 PANTHER SERINE/THREONINE PROTEIN KINASE IRE-RELATED 22 1128 - -
Aed5g0044 1354 MobiDBLite consensus disorder prediction 935 950 - -
Aed5g0044 1354 CDD ADK 1154 1321 IPR000850 GO:0005524|GO:0006139|GO:0019205
Aed5g0044 1354 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1148 1330 IPR027417 -
Aed5g0044 1354 MobiDBLite consensus disorder prediction 346 367 - -
Aed5g0044 1354 Hamap Adenylate kinase [adk]. 1151 1330 IPR000850 GO:0005524|GO:0006139|GO:0019205
Aed5g0044 1354 Gene3D Phosphorylase Kinase; domain 1 761 846 - -
Aed5g0044 1354 PRINTS Adenylate kinase signature 1182 1196 IPR000850 GO:0005524|GO:0006139|GO:0019205
Aed5g0044 1354 PRINTS Adenylate kinase signature 1154 1167 IPR000850 GO:0005524|GO:0006139|GO:0019205
Aed5g0044 1354 PRINTS Adenylate kinase signature 1230 1246 IPR000850 GO:0005524|GO:0006139|GO:0019205
Aed5g0044 1354 PRINTS Adenylate kinase signature 1294 1308 IPR000850 GO:0005524|GO:0006139|GO:0019205
Aed5g0044 1354 PRINTS Adenylate kinase signature 1277 1292 IPR000850 GO:0005524|GO:0006139|GO:0019205
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0044 Aed-Chr5 353043 364824 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0044 27 1128 AGC Kinase Gene Family AT5G62310 61.106 0.0 1330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Aed5g0044 Pkinase 6.4e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0044 - - gmx:100806311 1927.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0044 5 353043 364824 Aed5g0044 5 353043 364824 ECH