Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0009 ATGAAAGGTTCTGTTCTGTTGTGTTGTCCCATGGCTTCCACAGCAGCTCCAGTTCCTATCCACCGAGAAGCCAGGTTTTTGTTTTTGAGGATGAGGAGTGCTCCTCGTTGCACTAATTTGTTGCAGGTCCACGCGTCCTCTCGCAGACCACCCCCTGGAGTTGACACCAGAATCCATTGGGAAAACGAAGATGAAGGTTGGATTGGAGCCGAACGTACCAAACCAAATAATAACATGTTTGCTGCGGCTGATGACTTTCCTGATTTGCTCACTGCTTCTTTAGGTTCTCATTACGAATTCTTAGGAGTATCACCAGATGCTGATTTAGACGAAATTAAAGTTGCTTATCGGAAACTATCAAAGGAGTACCATCCCGACACAACTTCCCTCCCTCTCAAGACTGCATCAGAAAAATTCATGAAATTAAGAGAGGTTTACAACGTTCTTAGCAACGAAGAGAGTCGAAAATTCTATGACTGGACCCTTGCTCAGGAGGCTGCAAGCCGGCACGCGGAGAAGATGAAAATGAAATTGGAGGATCCCCGCGAGCAACAGCTCAAGAACTGGGAACCTGTTCCAGACATGGTTGACCGCCTTGGTGGAAGGAATATGAAGCTTAGTGATCAGGCAGTTTCTGCCATCACCATTGATCTTTTCATCATTGTTTTTGCCATATGCTGTATCATATATGTTCTTTTCTTTAAAGAACCATATTACTAG 720 0.4472 MKGSVLLCCPMASTAAPVPIHREARFLFLRMRSAPRCTNLLQVHASSRRPPPGVDTRIHWENEDEGWIGAERTKPNNNMFAAADDFPDLLTASLGSHYEFLGVSPDADLDEIKVAYRKLSKEYHPDTTSLPLKTASEKFMKLREVYNVLSNEESRKFYDWTLAQEAASRHAEKMKMKLEDPREQQLKNWEPVPDMVDRLGGRNMKLSDQAVSAITIDLFIIVFAICCIIYVLFFKEPYY 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0009 239 Gene3D DnaJ domain 87 182 IPR036869 -
Aed5g0009 239 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT T, CHLOROPLASTIC 36 238 IPR044618 -
Aed5g0009 239 SMART dnaj_3 95 154 IPR001623 -
Aed5g0009 239 PRINTS DnaJ domain signature 134 154 IPR001623 -
Aed5g0009 239 PRINTS DnaJ domain signature 98 116 IPR001623 -
Aed5g0009 239 PRINTS DnaJ domain signature 116 131 IPR001623 -
Aed5g0009 239 SUPERFAMILY Chaperone J-domain 95 164 IPR036869 -
Aed5g0009 239 Pfam DnaJ domain 97 159 IPR001623 -
Aed5g0009 239 ProSiteProfiles dnaJ domain profile. 96 162 IPR001623 -
Aed5g0009 239 CDD DnaJ 97 151 IPR001623 -
Aed5g0009 239 ProSitePatterns Nt-dnaJ domain signature. 139 158 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0009 Aed-Chr5 116544 121268 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0009 97 164 C2H2 Transcription Factor Family AT1G74250 37.500 9.26e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0009 K23051 - gmx:100805859 391.349