Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2618 ATGGAACGAAGTGGTGGAATGGTAACTGGGTCGCATGAAAGGAACGAACTTGTTAGAGTCAGACACGGTTCTGATAGCGGGTCTAAACCCTTGAAGAATTTGAATGGTCAGATTTGTCAAATATGTGGTGATACCATTGGATTAATGGCCACTGGTGATGTCTTTGCTGCTTGTCATGAGTGTGGCTTCCCACTTTGTCATTCTTGTTACGAGTATGAGCTGAAAAATGTGAGCCAATCTTGTCCCCAGTGCAAGACTAGAATGTCGGGTGAGTTTCCATGTGCTACTTCTGATGCTCAATCTATGCAAACATCAGGTCCTGTGGGTCAATCTGAAAAGGTTCACTCACTTCCATATGCTGATCCAAAGCAACCAGGTCCTGAGAGTGATGAAGAGATAAGAAGAGTGCCGGAGATTGGAGGTGAAAGTGCTGGAACTTCAGCCTCTCGGCCAGATGGCGGTTCAAATGCTGGCCCAGAACGTGTTCAGGGGACAGGGGAGGGGCAGAAGAAGAGAGGGAGAAGCCCGGCTGATAAAGAAAGCAAGCGGCTAAAGAGGCTACTGAGGAACAGAGTTTCAGCTCAGCAAGCAAGGGAGAGGAAGAAGGCATACCTGATTGATTTGGAAACAAGAATATTGAAGAACACAACAGCAAGCAGGAGAGGAAGCAATAGTGGTACCAATAATGCTGAATAA 696 0.467 MERSGGMVTGSHERNELVRVRHGSDSGSKPLKNLNGQICQICGDTIGLMATGDVFAACHECGFPLCHSCYEYELKNVSQSCPQCKTRMSGEFPCATSDAQSMQTSGPVGQSEKVHSLPYADPKQPGPESDEEIRRVPEIGGESAGTSASRPDGGSNAGPERVQGTGEGQKKRGRSPADKESKRLKRLLRNRVSAQQARERKKAYLIDLETRILKNTTASRRGSNSGTNNAE 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2618 231 CDD bZIP_HY5-like 183 212 - -
Aed4g2618 231 Pfam bZIP transcription factor 179 212 IPR004827 GO:0003700|GO:0006355
Aed4g2618 231 Gene3D - 181 224 - -
Aed4g2618 231 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 22 106 IPR013083 -
Aed4g2618 231 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 99 212 - -
Aed4g2618 231 MobiDBLite consensus disorder prediction 96 231 - -
Aed4g2618 231 MobiDBLite consensus disorder prediction 96 111 - -
Aed4g2618 231 SUPERFAMILY RING/U-box 23 90 - -
Aed4g2618 231 MobiDBLite consensus disorder prediction 212 231 - -
Aed4g2618 231 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 99 212 IPR044280 GO:0000981|GO:0045944
Aed4g2618 231 MobiDBLite consensus disorder prediction 1 26 - -
Aed4g2618 231 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 185 200 IPR004827 GO:0003700|GO:0006355
Aed4g2618 231 Pfam Zinc-binding RING-finger 29 90 IPR027934 -
Aed4g2618 231 ProSiteProfiles Zinc finger RING-type profile. 39 85 IPR001841 -
Aed4g2618 231 SUPERFAMILY Leucine zipper domain 182 213 IPR046347 GO:0003700|GO:0006355
Aed4g2618 231 MobiDBLite consensus disorder prediction 165 208 - -
Aed4g2618 231 Coils Coil 177 197 - -
Aed4g2618 231 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2618 Aed-Chr4 28025654 28031205 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2618 1 87 Glycosyltransferase AT4G32410 70.115 1.52e-41 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aed4g2618 zf-UDP 1.2e-29 CL0229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2618 - - cam:101493489 278.87