Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2615 ATGGCTACCCTTTCTTCTTTCAGTTTTGTACCCTTTTGCATGCTCTTCTTCCTTGTGTATCTCACTAGTCCTGTTTATGTTTCTTCACTTCCTCTTTCCCTGAGAAGGCAAGCTTCAATCCTTGTTTCTATGAAGCAAGATTTTGGAGTTGCTAACTCCTCTTCTCTGAGAAGCTGGGACATGTCAAACTACTTGTCCCTTTGCAGCAGTTGGTATGGCATTCAGTGTGACCATGACAACATGTCTGTGGTGTCACTTGACATATCCAATTTGAATGCTTCAGGGTCACTTTCACCTTCCATCACAGGACTCTTGAGCCTTGTGAGTGTCTCACTCCAGGGAAATGGCTTCTCTGGGGATTTTCCAAGTGACATTCACAAGCTACCAAGGCTGAGGTTCCTCAACATGTCCACCAACATGTTCAGTGAGAACTTGAGTTGGCAATTCTCACAGCTGAAGGAGCTTCAAGTGCTGGATGCTTATGACAATGCTTTCAATGGCTCACTTCCTGAAGGTGTCATTCATCTCCCAAAGATCAAGCACTTGAACTTTGGAGGGAACTACTTCTCTGGTGAAATCCCTCCAAGCTATGGAAACATGTGGCAGCTCAACTTTCTGTCCCTTGCAGGGAATGATTTGAGAGGCTATATTCCAACTGAGCTTGGGAATCTCACTAACCTCACTCATCTTTACTTGGGATACTACAATCAGTTTGATGGTGGAATCCCTCCTCAGTTTGGTAAGCTAATCAATTTGGTTCATCTAGACATTGCAAACTGTAGCTTGATAGGTCCAATTCCTGTTGAGTTGGGAAACCTCTACAAGTTAGACACTCTCTTCTTGCAAACTAATCAGCTAAGTGGTTCAATCCCTCCCCAGCTAGGAAACTTGACAAGATTGAAAGCCCTTGATCTATCATTCAACATGCTCACAGGAGGCATCCCTTATGAGTTCTCAGCCCTTCATGAGCTTACCCTCTTGAACTTGTTTATAAACAAGTTGCATGGGGAAATTCCTCACTTCATTGCTGAGCTACCTAAATTGGAGACTCTGAAGCTTTGGCAGAACAACTTCACTGGAGTAATTCCTTCAAACCTTGGCCAGAATGAAAGGTTGATTGAGCTTGACTTGTCAACAAATAAGCTCACTGGTTTGGTGCCAAAATCTCTATGCCTTGGAAAGAACCTGAAAATTTTGATCTTGCTCAAGAACTTTCTGTTTGGATCTTTGCCTGAGGATCTTGGTCAATGCCATACACTCCAAAGAGTCCGTTTGGGCCAGAACTATTTAACTGGGCCACTGCCACATGAGTTTCTTTATTTGCCTCAGCTATTACTTGTGGAGCTACAGAACAATTATCTTAGTGGTGGCTTTCCACAATCAACAACAAGCAACACAACCTCCAAACTAGCACAGTTGAACCTATCAAACAACCGGTTCTCAGGGTCTCTTCCAGCATCAATTGCAAATTTTCCAAACTTGCAAACTCTTCTGCTTAGTGGAAACAGATTATCAGGAGAAATCCCTCCAGATATAGGGAGATTGAAAAGTATCCTCAAATTGGATATAAGTGCTAACAACTTTTCAGGTACTATTCCACCTGAGATAGGTAACTGTGTCTTACTCACCTATTTAGATTTGAGCGAAAACCAACTATCAGGTCCTATTCCAGTCCAAGTTTCTCAAATTCACATATTAAACTATCTGAATGTCTCATGGAACTACCTAAACCAAAGCCTTCCCAAGGAACTTAGAAGCATGAAGGGCTTAACTTCAGCAGATTTCTCTCACAATAACTTCTCAGGCTCAATACCTGAGGGGGGGCAATTCTCACTCTTTAACTCCACATCCTTTGTTGGTAACCCTCAGTTATGTGGATATGACGACTCCAAGCCATGCAACCTTTCTTCAACAGTTGTGTTGGAATCTCAACAAAAAAGAAACGGTGCTAAACCCGGTGTCCCTGGGAAGTTCAAGTTCCTCTTTGCATTGGCATTGTTGGGGTGCTCATTGGTGTTTACAACATTGGCAATCATCAAGAGCAGAAAGACAAGGAGGCACTCCAATTCATGGAAGCTAACAGCATTCCAGAAGATGGAGTATGGGAGTGAAGACATCACAGGGTGCATAAAGGAAAGCAATGTCATAGGAAGAGGTGGATCTGGGATTGTGTACAGAGGAACCATGCCTAATGGAGAGGAAGTGGCAGTGAAGAAGCTCTTAGGAATCAACAAAGGGTCTTCCCATGACAATGGCCTCTCTGCAGAGATAAAAACATTGGGGAGAATCAGACACAGGACTTTTTTTTCACTCATTTTAATTTATGTTGCAGAATATGCATACACATTGAAAGTGGATGAGAAAAGTGATGTCTATAGCTTTGGAGTGGTGCTGCTAGAACTGGTAACGGGGAGAAGGCCAGTGGGGGATTTTGGGGAAGAAGGATTAGACATTGTTCAATGGACAAAGATGCAAACCAATTGGAACAAAGACATGGTGATGAAGATCCTTGATGAGCGGCTACATCACATTCCTTTAGCTGAAGCAAAACAAGTGTTTTTTGTGGCAATGTTGTGTGTTCATGAACACAGTGTGGAGCGACCAACCATGAGGGAAGTGGTTGAAATGCTTGCACAAGCAAAGCAACCAAACACATTTCAAATGCAGTGA 2670 0.4288 MATLSSFSFVPFCMLFFLVYLTSPVYVSSLPLSLRRQASILVSMKQDFGVANSSSLRSWDMSNYLSLCSSWYGIQCDHDNMSVVSLDISNLNASGSLSPSITGLLSLVSVSLQGNGFSGDFPSDIHKLPRLRFLNMSTNMFSENLSWQFSQLKELQVLDAYDNAFNGSLPEGVIHLPKIKHLNFGGNYFSGEIPPSYGNMWQLNFLSLAGNDLRGYIPTELGNLTNLTHLYLGYYNQFDGGIPPQFGKLINLVHLDIANCSLIGPIPVELGNLYKLDTLFLQTNQLSGSIPPQLGNLTRLKALDLSFNMLTGGIPYEFSALHELTLLNLFINKLHGEIPHFIAELPKLETLKLWQNNFTGVIPSNLGQNERLIELDLSTNKLTGLVPKSLCLGKNLKILILLKNFLFGSLPEDLGQCHTLQRVRLGQNYLTGPLPHEFLYLPQLLLVELQNNYLSGGFPQSTTSNTTSKLAQLNLSNNRFSGSLPASIANFPNLQTLLLSGNRLSGEIPPDIGRLKSILKLDISANNFSGTIPPEIGNCVLLTYLDLSENQLSGPIPVQVSQIHILNYLNVSWNYLNQSLPKELRSMKGLTSADFSHNNFSGSIPEGGQFSLFNSTSFVGNPQLCGYDDSKPCNLSSTVVLESQQKRNGAKPGVPGKFKFLFALALLGCSLVFTTLAIIKSRKTRRHSNSWKLTAFQKMEYGSEDITGCIKESNVIGRGGSGIVYRGTMPNGEEVAVKKLLGINKGSSHDNGLSAEIKTLGRIRHRTFFSLILIYVAEYAYTLKVDEKSDVYSFGVVLLELVTGRRPVGDFGEEGLDIVQWTKMQTNWNKDMVMKILDERLHHIPLAEAKQVFFVAMLCVHEHSVERPTMREVVEMLAQAKQPNTFQMQ 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2615 889 Gene3D Ribonuclease Inhibitor 372 636 IPR032675 -
Aed4g2615 889 Gene3D Phosphorylase Kinase; domain 1 676 779 - -
Aed4g2615 889 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM3 777 886 - -
Aed4g2615 889 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM3 13 772 - -
Aed4g2615 889 PANTHER UNNAMED PRODUCT 777 886 - -
Aed4g2615 889 PANTHER UNNAMED PRODUCT 13 772 - -
Aed4g2615 889 Pfam Protein tyrosine and serine/threonine kinase 778 877 IPR001245 GO:0004672|GO:0006468
Aed4g2615 889 ProSitePatterns Protein kinases ATP-binding region signature. 716 739 IPR017441 GO:0005524
Aed4g2615 889 Gene3D Transferase(Phosphotransferase) domain 1 780 884 - -
Aed4g2615 889 SMART serkin_6 710 854 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g2615 889 SUPERFAMILY Protein kinase-like (PK-like) 697 877 IPR011009 -
Aed4g2615 889 Pfam Leucine Rich Repeat 251 273 IPR001611 GO:0005515
Aed4g2615 889 Pfam Leucine rich repeat N-terminal domain 37 77 IPR013210 -
Aed4g2615 889 SUPERFAMILY RNI-like 85 431 - -
Aed4g2615 889 SMART LRR_typ_2 345 369 IPR003591 -
Aed4g2615 889 SMART LRR_typ_2 370 392 IPR003591 -
Aed4g2615 889 SMART LRR_typ_2 152 176 IPR003591 -
Aed4g2615 889 SMART LRR_typ_2 128 151 IPR003591 -
Aed4g2615 889 SMART LRR_typ_2 273 297 IPR003591 -
Aed4g2615 889 SMART LRR_typ_2 491 515 IPR003591 -
Aed4g2615 889 Gene3D Ribonuclease Inhibitor 293 371 IPR032675 -
Aed4g2615 889 Gene3D Ribonuclease Inhibitor 193 292 IPR032675 -
Aed4g2615 889 Gene3D Ribonuclease Inhibitor 34 192 IPR032675 -
Aed4g2615 889 SUPERFAMILY L domain-like 371 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2615 Aed-Chr4 27960251 27964494 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2615 775 879 Receptor kinase-like Gene Family AT5G65700 69.811 1.03e-39 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aed4g2615 PK_Tyr_Ser-Thr 3.6e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2615 - - gmx:100803075 1373.99