Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2614 ATGACGAGTGTGATTCTCAGAAGATCCTCTTCCGTAATCTCGCGCCGCTTCTTCGCCGCTCTTGCCTCCGTCGAGCCGCTTCCGCACAGCCACCACCGCCACGGCGTCTCCGGCGACGTAGCCCGGACCTTTCACGCTAAGGCCGGACCGTTGTGTTTCCGCGCCTCGCTGGTTCCACGCGCGGCGCAGGTCGCCTTGGAGCGCGATTACTCCAACTACGAGGAAGCTGGCGGCGCGAATTCCGACGAAGGACTCGAGATCGCGAAGCTCGGGATCGCCCCGGAGATCGTAGATGCGCTGGCCAAGAAAGGGATCGCGAAGCTTTTTCCCATTCAGAGAGCTGTGCTGGAACCTGCGATGCAAGGACGTGATATGATTGGTCGAGCTAGAACAGGAACTGGGAAAACTCTTGCTTTTGGGATACCCATCTTGGACAGGATCATTAAGTTTAATGCTAAGCATGGGCGAGGAAAGAACCCTTTGGCTTTGGTTTTGGCTCCGACTAGGGAGCTTGCGCGGCAGGTTGAGAAGGAATTCAATGAGGCTGCACCTAACTTGGAGACGATTTGTCTTTATGGGGGTATGCCAATCCAGCAACAAATGAGGCAGCTTAATTACGGCGTAGATATTGCAGTAGGCACGCCTGGTCGAATTATTGATCTTCTCAACAGGGGGGCACTGAATTTGAAGGAGGTCAAGTTTGTTGTTCTTGATGAAGCTGATCAGATGCTTCAAGTAGGATTTCAAGAAGCTGTGGAGAAGATCTTGGAGGGATTATCTCCAAAGCGTCAAACTGTTATGTTCTCAGCAACAATGCCATCTTGGATAAAGAGTATTACTCGCAATTACCTGAACAACCCCCTAACCATTGATCTTGTTGGAGATTCTGATCAGAAGTTGGCAGATGGAATTTCGTTGTACTCTATTGTGTCTGATGGGTACACTAAAGCAGGAATTCTTGCACCTCTGATAACAGAACATGCAAATGGAGGAAAGTGTATTGTTTTCACTCAAACGAAACGTGATGCTGATCGATTATCATATGGCATGGCAAAAAGCCTTAGATGTGAGGCATTGCATGGAGATATTTCACAAACTCAGAGGGAAAGAACTCTTGCTGGTTTCAGAAACAACAATTTTAATGTTTTAGTTGCAACTGATGTTGCTTCTCGTGGGCTTGATATTCCCAATGTTGATCTTGTAATACATTATGATCTTCCCAGTTCATCAGAGATATTTGTTCATCGATCTGGACGAACTGGCCGTGCTGGGAAGAAAGGAAGTGCTATTCTTGTTTACAAAAGAGACCAATTCACGGCTGTAAAGACTATTGAGCGTGATGTTGGGTGCAAATTTACAGAGCTACCAAAGATTGATGTTCCAAGTGGATCAGTAGAGATGTTTAGTGGCATGGGTGGTGGTCGTTTTGGCTCTACAAGGGATCGTCAATCTGGAGGTACAGGTTTTGGTCGCAGTCCTGGATTTGGTCGTTCTGGGAGTTATGGTAACTCTGGATCTGGGCGTCCTAGCTATGGAAATTCCAGTGAGACCAGGTTTGGTGGAAATTCTAGCCGTTTTGGTGGTCCTAGTTCAAGTCAGTTTGGAGGCGGTTTTGGAGTATCTTCTGGTAATTCTTCTAGTGAAATGAATAGATATGGCTTTGGTTCTGGTCAAGCAGGAACTCAATCTGGTGGAAATTCTCGCCCCAGTGGTTTTGGAGGATTTGGTGGTTTCAGAAATTTTGGGTCGGGTCAATCTGGTGCATTTGGTGATTCACATGGTAACCCAAATAATGACAGTTACAATAGTGGAAAGCCGTTTTGA 1824 0.4715 MTSVILRRSSSVISRRFFAALASVEPLPHSHHRHGVSGDVARTFHAKAGPLCFRASLVPRAAQVALERDYSNYEEAGGANSDEGLEIAKLGIAPEIVDALAKKGIAKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDRIIKFNAKHGRGKNPLALVLAPTRELARQVEKEFNEAAPNLETICLYGGMPIQQQMRQLNYGVDIAVGTPGRIIDLLNRGALNLKEVKFVVLDEADQMLQVGFQEAVEKILEGLSPKRQTVMFSATMPSWIKSITRNYLNNPLTIDLVGDSDQKLADGISLYSIVSDGYTKAGILAPLITEHANGGKCIVFTQTKRDADRLSYGMAKSLRCEALHGDISQTQRERTLAGFRNNNFNVLVATDVASRGLDIPNVDLVIHYDLPSSSEIFVHRSGRTGRAGKKGSAILVYKRDQFTAVKTIERDVGCKFTELPKIDVPSGSVEMFSGMGGGRFGSTRDRQSGGTGFGRSPGFGRSGSYGNSGSGRPSYGNSSETRFGGNSSRFGGPSSSQFGGGFGVSSGNSSSEMNRYGFGSGQAGTQSGGNSRPSGFGGFGGFRNFGSGQSGAFGDSHGNPNNDSYNSGKPF 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2614 607 Gene3D - 315 466 IPR027417 -
Aed4g2614 607 PANTHER RNA HELICASE 3 540 - -
Aed4g2614 607 MobiDBLite consensus disorder prediction 585 607 - -
Aed4g2614 607 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 319 466 IPR001650 -
Aed4g2614 607 MobiDBLite consensus disorder prediction 497 569 - -
Aed4g2614 607 SMART helicmild6 344 424 IPR001650 -
Aed4g2614 607 CDD DEADc 96 291 - -
Aed4g2614 607 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE-LIKE PROTEIN 3 540 - -
Aed4g2614 607 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 116 290 IPR014001 -
Aed4g2614 607 CDD SF2_C_DEAD 304 433 - -
Aed4g2614 607 Gene3D - 86 294 IPR027417 -
Aed4g2614 607 Pfam DEAD/DEAH box helicase 109 277 IPR011545 GO:0003676|GO:0005524
Aed4g2614 607 Pfam Helicase conserved C-terminal domain 319 424 IPR001650 -
Aed4g2614 607 MobiDBLite consensus disorder prediction 469 607 - -
Aed4g2614 607 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 444 IPR027417 -
Aed4g2614 607 SMART ultradead3 104 307 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2614 Aed-Chr4 27947510 27951811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2614 90 456 Eukaryotic Initiation Factors Gene Family AT3G19760 32.615 3.22e-64 215