Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2599 ATGAAGAATTCTAACAAAACTGGCGTACGGAAGTACCACAAATCGGAAAATCCAAGGTTGCGTTGGACACCTGAACTCCATGAATACTTTGTTGAAGTTGTGGAAGGTCTTGGTGGAACAAACAAGGCAACCCCAAAGAGCATTCTGCAGATGATGCATGTGAAAGGACTAAGGATCTCTCACATTAAAAGCCATCTTCAGATGTACAGGAACATGAAGGGACATACGATTCTGGCATCAATGCATGATCATGAAGAGCATGTTAACGATCATCACCCAATCTGCTCCAACTGTTCATCCCAAAGATCACATGAAATTAAACTAAAGGCATCAAAATATGATACGGGGATGATTGTCAATCAAGAAATTCACCCATTAGAAAATAAAGGACTTTCACAGACCAGTGAAACAGCTGATTACGATCTAAATAAGGAACCCGAGTCAAGTGCATGCTTACTTAGTGATACGTCAAATGAAGAAAATAGTAGAACATTGAAATTTCTTGATCTCTCATTCTCTTTCAGCTCTCCACTGATTCCAACGATGAACGGTGATGATCAAGTGAGAATGCGTTTTTCTTCACCAAATAATCGTGTCATCGATTCTATTAATTCTCTACAATCTCATGGGAAGAGCAATTATATAAATTTAGACCTAACTATATGA 666 0.3844 MKNSNKTGVRKYHKSENPRLRWTPELHEYFVEVVEGLGGTNKATPKSILQMMHVKGLRISHIKSHLQMYRNMKGHTILASMHDHEEHVNDHHPICSNCSSQRSHEIKLKASKYDTGMIVNQEIHPLENKGLSQTSETADYDLNKEPESSACLLSDTSNEENSRTLKFLDLSFSFSSPLIPTMNGDDQVRMRFSSPNNRVIDSINSLQSHGKSNYINLDLTI 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2599 221 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 3 171 IPR044848 GO:0003700
Aed4g2599 221 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 17 72 IPR006447 GO:0003677
Aed4g2599 221 Gene3D - 17 74 - -
Aed4g2599 221 SUPERFAMILY Homeodomain-like 16 71 IPR009057 -
Aed4g2599 221 Pfam Myb-like DNA-binding domain 20 70 IPR001005 -
Aed4g2599 221 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 3 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2599 Aed-Chr4 27821651 27824480 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2599 8 73 G2-like Transcription Factor Family AT1G14600 65.152 1.29e-23 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aed4g2599 Myb_DNA-binding 5.2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2599 - - ccaj:109790621 321.627