Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2596 ATGCACCATTTTCTGATTGCTAGATTAACAACTAGGACACCCCATTATAGTTTTCTCTGTTACAATGCTATTCCTTTCTTCACTTCACGTTCTCTATCTGTAGTAACAAGCACAAATCACCCCAAAGGTGGCACCTTTAATGTATTTAGCCTCATAAACTCATCTGGGTTGTCCCCTGAAATTGCCCTGAAACACTCCAAAAGGTTGGAATTGAAAAACCCAGATGGGCCAAATGCTGTAATTGATCTTCTCAGGAACTATGGGTTCTCCGATTCCCAGCTATGTAGCTTTGTAAAGAAAATCCCTTTTGTGCTTTTCTCAAAACCTGAGAAGACCCTTTTGCCAAAACTCAAGTTCTTCCATTCTATTGGGTTTTCAACCACTGACCTTCCCAGATTCCTCATTGGAAACACTACATTTTTTAGATTAAGCTTGGAAAAAACCATTATCCCCCGTTACCAGATCATCAAGAGTCTAGTTCACAGTGATAATGAAGTAGTTTCCACTTTGAAGAATGATAGGTGGTACTTGAACTCCAACCATGGAACTTCAATTCATGATTCAGTTCCAAATGTAGGGGTTTTGAGACAGCTTGGGGTGCCTCAACGTTCCATTTCCTTGTTGGTAACCAATTTTCCTAGTGTAATATTTATGAAGCATTCAAGATTTGTTGAGGCTGTGGAGAAAGTGAAGGAAATGGGGTTTGATCCTTTGAAATCAAACTTTGTTTTGGCCCTTCAAGTGCTTGCAAAGATTAATGAAGCAATGTGGAAGTCAAAGTTAAAGATTTTTGAGGAGTGGGGATGGTCCAGAGATATCTGTCTTTTGGCTTTCAAAAAGCATCCCCAGCTTATGATGCTGTCAGAAGAGAAGATTATGAAAATATTGAACTTCTTGATGAAAGACATGGGTTTGACCGTAGAAAACATCTCTGGATGCCCCGTGATTCTTAAATGCAACTTGGAGAAGACGGTTATGCCTAGATTTGCAGTTGTTGAAATATTGAAGTCAAAGGGTTTGATAAAGAGAGATTTTAAATTAGTAGCTTTATCAAGATCAGTGAGAAAACGTTTTTGGAGAGATACGTGA 1089 0.3884 MHHFLIARLTTRTPHYSFLCYNAIPFFTSRSLSVVTSTNHPKGGTFNVFSLINSSGLSPEIALKHSKRLELKNPDGPNAVIDLLRNYGFSDSQLCSFVKKIPFVLFSKPEKTLLPKLKFFHSIGFSTTDLPRFLIGNTTFFRLSLEKTIIPRYQIIKSLVHSDNEVVSTLKNDRWYLNSNHGTSIHDSVPNVGVLRQLGVPQRSISLLVTNFPSVIFMKHSRFVEAVEKVKEMGFDPLKSNFVLALQVLAKINEAMWKSKLKIFEEWGWSRDICLLAFKKHPQLMMLSEEKIMKILNFLMKDMGLTVENISGCPVILKCNLEKTVMPRFAVVEILKSKGLIKRDFKLVALSRSVRKRFWRDT 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2596 362 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 22 358 - -
Aed4g2596 362 SMART mt_12 275 306 IPR003690 GO:0003690|GO:0006355
Aed4g2596 362 SMART mt_12 95 126 IPR003690 GO:0003690|GO:0006355
Aed4g2596 362 SMART mt_12 131 162 IPR003690 GO:0003690|GO:0006355
Aed4g2596 362 SMART mt_12 206 236 IPR003690 GO:0003690|GO:0006355
Aed4g2596 362 SMART mt_12 307 341 IPR003690 GO:0003690|GO:0006355
Aed4g2596 362 Pfam mTERF 252 343 IPR003690 GO:0003690|GO:0006355
Aed4g2596 362 Pfam mTERF 81 236 IPR003690 GO:0003690|GO:0006355
Aed4g2596 362 Gene3D Transcription termination factor 3, mitochondrial 166 362 IPR038538 -
Aed4g2596 362 PANTHER CGI-12 PROTEIN-RELATED 22 358 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2596 Aed-Chr4 27809972 27811060 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aed4g2596 mTERF 3.2e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2596 K15032 - gmx:106799612 558.525