Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2593 ATGCCTAAGATCATACTTCGTAGCCATGTTATCTTGAAGAGAAGCTTGGAAAATTGCCTCATCCCAGGTTATGAGATCCCCCGGGGTATAGTTCACGATGAGCAGAAAGATCTTAGAGCTTTGAGAAACGCCTCCATTAATTTTACAATGTGTAACTTGAGGAAAGACTTGGCTTCAAACATTGATGTTTTGAGGCAATCCGGTGTGCCTCAAGCTTCCATTTCTCTCTTGATGATCCATTTTCCATCTGCCGCTAATGTAAAGCATTTGAAATTTGTGGAAGCTGTTGAGATGGTTAAGGAAATTGGGTGTAGTCCTTTGAAGACGGCCTTTGTCATGGCTGTCCAAGAAATGTTTCTTAAAGCATTCATAATGTATCCCAATTTTGTGAAGTTGTCAGATGAGATGTTTACCAAAAAAATGAGTTTCATACTGAAGGATATGGGTCTGCCATCAGAAGATATTGCTGAATATCCCTCAGTTCTAGCCTACAGCTTGGAGAAGAGGATTATCCCTAGATTCCATGTAATTAAAATCTTGAAATCAAAAGGTCTGCTCAAGAATAGTTTTCACTTTAGCTCCTTTATGACCACAACTGAGGAAGTTTTTTTGGAGAAATTTGTCATCAACTTTCAGAATGATTTGCCTCTTTTAGCAGATGTCTACAAAGGTTCGATTGATTATCAGAAAGTAATGTAG 699 0.3848 MPKIILRSHVILKRSLENCLIPGYEIPRGIVHDEQKDLRALRNASINFTMCNLRKDLASNIDVLRQSGVPQASISLLMIHFPSAANVKHLKFVEAVEMVKEIGCSPLKTAFVMAVQEMFLKAFIMYPNFVKLSDEMFTKKMSFILKDMGLPSEDIAEYPSVLAYSLEKRIIPRFHVIKILKSKGLLKNSFHFSSFMTTTEEVFLEKFVINFQNDLPLLADVYKGSIDYQKVM 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2593 232 PANTHER CGI-12 PROTEIN-RELATED 117 225 IPR003690 GO:0003690|GO:0006355
Aed4g2593 232 PANTHER CGI-12 PROTEIN-RELATED 2 116 IPR003690 GO:0003690|GO:0006355
Aed4g2593 232 Gene3D Transcription termination factor 3, mitochondrial 1 213 IPR038538 -
Aed4g2593 232 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 117 225 - -
Aed4g2593 232 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 2 116 - -
Aed4g2593 232 Pfam mTERF 124 204 IPR003690 GO:0003690|GO:0006355
Aed4g2593 232 SMART mt_12 120 151 IPR003690 GO:0003690|GO:0006355
Aed4g2593 232 SMART mt_12 152 186 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2593 Aed-Chr4 27788968 27789737 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aed4g2593 mTERF 6.2e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2593 K15032 - gmx:100813396 257.684