Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2591 ATGGTGTCTAATTTTCTTCTTATTGCAAGATTAACTGCATCATCATTCACACGCTACAAGAGCACCCATATCCCATTGGGTTCTCTATTGCAACACAAGCACACTGCTTCACTTTTTTTCTTCAATTCATTCACTTCAGGCACCTCTTCTGATTCCGAATCAGATGGAAACCACCACAAAGGTGAAACCTTTACTGTGTCTTACCTCATCGACTCATGTGGGGTGTCCCCAACACTGGCTAGGGAACTCTCCAACACGGTCAATTTGAAAACCCCAGATGGCCCAAATGCTGTTCTTGATCTTCTCAACAACTATGGCTTCTCAAAAATACAGCTTGCAAAACTTGTGGTGAGACATCCTTTAGTGCTTGTTGCAAATGCAGAGAATACCCTTTTGCCTAAACTCAAGTTCTTTCGTTCTATCGGGGTTTCCGACGCTGACATGCCTAAGATCCTAATTGCAAATCATTCTATCTTGAAGAGGAACTTGGAAAAATGTCTCATCCCACGTTATGAGATCCTAAAGAGTCTACTCCGCGACGATCGGGAAGTTGTAAGAACTATGAAAAATGCTCCTCTCGGATTTATATACGGTGACTTAGTGAATGGCTTGGTTCCTAACATTAAATTTTTGAAGCAATCTAGTGTGCCTCAGGCATCGATTTCGCTCCTAATGACCACTGCTCTTTCTGCAGCATATGTGGAGCATTCCAGATTTGTGGAAGCTGTCAAGACAGTTAAGGAAACCGGGTTTAGTCCTTTGAAGATAAATTTTGTCATGGCAATTTACGTGCTTGTAACAATGAGGAAAGAAGTCTGGGAATCGAAGTTTGAGGTTTATGAGAGGTGGGGCTGGAACCGCGAATTGGCTCTTCGAGCATTTAGAAAGTTTCCTGGCTTTATGAAGTTTTCAGGGGAGTCGTTTGCCAAAAAAATGAGTTTCCTGGTGAATGATATGGGTTGGCCATCAGAAGCTATTGCTGAATATCCTCAACTTGTAGCTTACAGCTTGGAGAAGAGAATTATCCCTAGGTTCTCAGTTATCAAAATCTTGAAATCAAAAGGTCTGCTTGACAAAAACACACACTTTAGTTCCATTATTTGCATAACTGAGGAGAAGTTTTTGGAGAGATTTGTTGTCAATTTTCAGAATGTTCTGCCTTTCTTACCAGATGTCTACAGAGGTGTGATCAATCCTTCAAATTTAATGTAA 1212 0.4109 MVSNFLLIARLTASSFTRYKSTHIPLGSLLQHKHTASLFFFNSFTSGTSSDSESDGNHHKGETFTVSYLIDSCGVSPTLARELSNTVNLKTPDGPNAVLDLLNNYGFSKIQLAKLVVRHPLVLVANAENTLLPKLKFFRSIGVSDADMPKILIANHSILKRNLEKCLIPRYEILKSLLRDDREVVRTMKNAPLGFIYGDLVNGLVPNIKFLKQSSVPQASISLLMTTALSAAYVEHSRFVEAVKTVKETGFSPLKINFVMAIYVLVTMRKEVWESKFEVYERWGWNRELALRAFRKFPGFMKFSGESFAKKMSFLVNDMGWPSEAIAEYPQLVAYSLEKRIIPRFSVIKILKSKGLLDKNTHFSSIICITEEKFLERFVVNFQNVLPFLPDVYRGVINPSNLM 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2591 403 SMART mt_12 113 144 IPR003690 GO:0003690|GO:0006355
Aed4g2591 403 SMART mt_12 291 322 IPR003690 GO:0003690|GO:0006355
Aed4g2591 403 SMART mt_12 323 357 IPR003690 GO:0003690|GO:0006355
Aed4g2591 403 SMART mt_12 256 286 IPR003690 GO:0003690|GO:0006355
Aed4g2591 403 SMART mt_12 149 180 IPR003690 GO:0003690|GO:0006355
Aed4g2591 403 PANTHER CGI-12 PROTEIN-RELATED 35 395 IPR003690 GO:0003690|GO:0006355
Aed4g2591 403 Gene3D Transcription termination factor 3, mitochondrial 72 196 IPR038538 -
Aed4g2591 403 Gene3D Transcription termination factor 3, mitochondrial 197 385 IPR038538 -
Aed4g2591 403 Pfam mTERF 268 375 IPR003690 GO:0003690|GO:0006355
Aed4g2591 403 Pfam mTERF 99 306 IPR003690 GO:0003690|GO:0006355
Aed4g2591 403 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 35 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2591 Aed-Chr4 27776052 27777263 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aed4g2591 mTERF 4.4e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2591 K15032 - gmx:100786641 671.003