Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2590 ATGGTGCCTAAGTTTCTTATTGCAAGATTAACATCATTCACACGCTGCAAGAGCACCAATATCCAATTGGGTTCTCTGCTGCAACAGAATCACAATGCTTCACTTTTTTTCTTCAATTCTTTCTCTTCAGGCACCTCTTCTGAATCTGAATCAGATGAAAACCATCACAAAGGTGACACCTTTACCGTGTCTTACCTCATCAACTCATGTGGTGTGTCCCCAAAACTGGCCAGGGAACTCTCCAACAGGCTCAATTTGAAAACCCCAGATGGCCCAAATGCTGTTCTTGATCTTCTCAACAGCTATGGCTTCTCAAAAACACATCTTGCAAAACTTGTGGAGAGAAAGCCCTTAGTGCTTGTTGCAAATGCAGAGAACACCCTTTTGCCTAAACTCAAGTTCTTCCGTTCTATTGGGATTTCCAACACTGACATGCCTAAAATCCTAATTGCTAGCCATCATATGCTGTTCAGAAGCTTGGAAAAATGCCTCATTCCACGTTATGAGATCCTAAGGAGTCTACTTCGTGACGAAGGGGAAGTTGTTAGAGCTTTGAAAAGTGCCCCATTTGGTTTCACATATGGTGACATGATGAAACACTTGGTTCCAAACATTACGGTTTTGAGGCAATCTGGTGTGCCCCAAGGTTCCATCTCTTACCTGCTGATGCATTCTGGGACTCTAGCCTACAGGGAGCATTCCAAATTTGTTGAAGCTGTCAACACTGCTAAGGAATTTGGGTTTAATCCTTTGAGAACAACTTTTGTCGTGGGTGTTGAAATGCTTGTAACTAAGAGCAAAGCAGTATGGGAATCAAGGTTTGAGATTTACGAGAGGTGGGGCTGGAACCGCGAAATGGCTCTTCGAGCAGTTCAAAAGTTCCCCTGTTTTCTGAAGTTGTCAGAGGAGATGTTTACCAAAAAAATGAGTTTCCTAGTGAATGATATGGGTTGGTCATCAGGAGATATTGCTGAATATCCTCAAGTTGTAACATACAGCTTAGAGAAGAGGATTATCCCTAGATTCTCGGTGATCAAAATCTTGAAATCAAAAGGTCTGCTTGTGAAGAAGATGCATTTTAGTGCCATTATTTGCATAACTGACGGGATTTTTTTGGAGAAATTTGTCATCAATTTTCAGAAAGATTTGCCTTTCTTGCCAGATTTCTACAACAGTTTAATCAATCAACAGAATAATAATGAGCAAATGAAGAACAAAGGATACAAAACGATTTTACTTAAGAAATGCTTAAGATACGTGGGCAAGTTGTTCGTGAATTACAGCAGAGTGTACCACTCCAATATTATGGATAGATATCTATTCATACGAATATCAAGTTTGTTGATTTGTTTTCTATATTCCATTCCTCCAGCAATGGACAGAGTGCGTACCTTCATTAAGTGTGTCTCACAGTTATTCTTGCTCAAGTTGGGTGTTATGTTCCTGCCCACTTCTCAATTTTGGTTGGTACAAAGCTTGGTAAGTTTATTACTACCTAGTCTTATCCCATTATCAACATATCATGTGTTTTGA 1533 0.3999 MVPKFLIARLTSFTRCKSTNIQLGSLLQQNHNASLFFFNSFSSGTSSESESDENHHKGDTFTVSYLINSCGVSPKLARELSNRLNLKTPDGPNAVLDLLNSYGFSKTHLAKLVERKPLVLVANAENTLLPKLKFFRSIGISNTDMPKILIASHHMLFRSLEKCLIPRYEILRSLLRDEGEVVRALKSAPFGFTYGDMMKHLVPNITVLRQSGVPQGSISYLLMHSGTLAYREHSKFVEAVNTAKEFGFNPLRTTFVVGVEMLVTKSKAVWESRFEIYERWGWNREMALRAVQKFPCFLKLSEEMFTKKMSFLVNDMGWSSGDIAEYPQVVTYSLEKRIIPRFSVIKILKSKGLLVKKMHFSAIICITDGIFLEKFVINFQKDLPFLPDFYNSLINQQNNNEQMKNKGYKTILLKKCLRYVGKLFVNYSRVYHSNIMDRYLFIRISSLLICFLYSIPPAMDRVRTFIKCVSQLFLLKLGVMFLPTSQFWLVQSLVSLLLPSLIPLSTYHVF 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2590 510 Gene3D Transcription termination factor 3, mitochondrial 177 383 IPR038538 -
Aed4g2590 510 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 16 392 - -
Aed4g2590 510 PANTHER CGI-12 PROTEIN-RELATED 16 392 IPR003690 GO:0003690|GO:0006355
Aed4g2590 510 Pfam mTERF 96 249 IPR003690 GO:0003690|GO:0006355
Aed4g2590 510 Pfam mTERF 262 371 IPR003690 GO:0003690|GO:0006355
Aed4g2590 510 SMART mt_12 146 177 IPR003690 GO:0003690|GO:0006355
Aed4g2590 510 SMART mt_12 288 319 IPR003690 GO:0003690|GO:0006355
Aed4g2590 510 SMART mt_12 182 214 IPR003690 GO:0003690|GO:0006355
Aed4g2590 510 SMART mt_12 110 141 IPR003690 GO:0003690|GO:0006355
Aed4g2590 510 SMART mt_12 320 354 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2590 Aed-Chr4 27771105 27774452 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aed4g2590 mTERF 2.4e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2590 K15032 - gmx:100806920 620.157