Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2587 ATGGGAGTTGAAAATGGGGACGATTTCTCCGTAATTGTGACCAATGAAGAAGTGGTGGCAGCAGTGGTACCAATGCAAGAACATTGGCTTCCACTTTCAAACCTTGACCTACTTCTACCTTCACTCGATGTAGGAGTTTTCTTTTGCTACAAAAACCCTATGCTCACATCCACAACCTTAGTACTGGACACTTGCAACAACAAAATGAACTTTGGATCCATGGTGGGATCCCTTAAGAAGGCCTTGGCACAAACCCTAATTTCTTATTATGTATTTGCAGGTGAAGTTGTGTCTAACAACATGGGTGAACCCGAAGTGCTTTGTAATAACCGTGGAGTTGATTTTGTTGAAGCTCAGGCTAATGTGGAGCTCAAGTGCCTCAACTTTTACAACCCGGATCATACCATTGAAGGCAAGTTTGTTCCAAAGAAAAAGAATGGTGTGCTTGCTGTCCAGGCAACTTCACTCAAGTGTGGTGGAATAATAGTGGCATGCACATTTGACCATCGTGTAGCAGATGCCTATTCAACAAACATGTTCCTTGTTTCATGGGCCGAGATGGCCCAGCCCACCAACGGCTCCGCCGTCGCAACTGCTTCTCGTCACCCATGTTTCCGTCGTTCCCTTCTCAGCTCAAGCCGTTCGGGTTCTATCCACTCTTCCATACACCACATGTACATCCCGATCTCCGAGATCCCTCCTCCTCCGGCCACCCCGGCCACCGATCTCCTCAGCCGCATATACTACGTCACGGAGGAGCAGCTCCACCGCATGCAGTCCCTTGCCAACACGCGCACAAAGCTCGAGTGTTTCTCCGCATTCTTGTGGAAGATGGTTGCACGTGCGGCTTCCAAAGAGAAAAATGGTAAAAGGGCTGTTGCCAAAATGGGCATTGTAGTTGACGGAAGAAAAAAACTTGGCAAGGGTGACAAAGAGAGGGAAACAATGATGGAGTGTTACTTTGGAAACGTTCTTTCCATACCCTTTGGCGGGAAACTGGTGGAGGAGTTAGTGGATGAGCCATTAGGGTTTGTGGCAGAGGCGGTTCACGAGTTTTTGACGACGGCGGCCACCAAGGAACACTTCTTAGGACTCATTGATTGGGTGGAGGCTCATAGGCCGATCCCTGGAGTTGCTAAAATTTATTGCAGCAACACCAATGAGGGACCAGCCTTTGTGGTGTCCTCCGGACAGAGATTCCCGGAGGACAAGGTGGATTTTGGGTGGGGGAAGGTTGTGTTTGCATCATACCATTTTCCTTGGGGTGGTGAAGCTGGTTATGTTATGCCAATGCCAAGTCCTTTGGGGAACGGTGATTGGGTTGTGTATATGCACCTTGCAAAGAGGCAGTTGGAGATCATAGAGTCTGAGGCGGCTCATGTCTTTAAGCCCTTAACTTGGGACTACCTTAACAAGTAA 1419 0.4856 MGVENGDDFSVIVTNEEVVAAVVPMQEHWLPLSNLDLLLPSLDVGVFFCYKNPMLTSTTLVLDTCNNKMNFGSMVGSLKKALAQTLISYYVFAGEVVSNNMGEPEVLCNNRGVDFVEAQANVELKCLNFYNPDHTIEGKFVPKKKNGVLAVQATSLKCGGIIVACTFDHRVADAYSTNMFLVSWAEMAQPTNGSAVATASRHPCFRRSLLSSSRSGSIHSSIHHMYIPISEIPPPPATPATDLLSRIYYVTEEQLHRMQSLANTRTKLECFSAFLWKMVARAASKEKNGKRAVAKMGIVVDGRKKLGKGDKERETMMECYFGNVLSIPFGGKLVEELVDEPLGFVAEAVHEFLTTAATKEHFLGLIDWVEAHRPIPGVAKIYCSNTNEGPAFVVSSGQRFPEDKVDFGWGKVVFASYHFPWGGEAGYVMPMPSPLGNGDWVVYMHLAKRQLEIIESEAAHVFKPLTWDYLNK 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2587 472 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 9 467 - -
Aed4g2587 472 Gene3D - 10 228 IPR023213 -
Aed4g2587 472 Gene3D - 229 457 IPR023213 -
Aed4g2587 472 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 9 467 - -
Aed4g2587 472 Pfam Transferase family 10 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2587 Aed-Chr4 27758721 27761476 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2587 20 455 Monolignol Biosynthesis Gene Families AT5G48930 23.297 2.79e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2587 - - gmx:100785067 764.607