Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aed4g2580 | ATGGTGGAGAAGTGTCTCATTGAGAAGGAAATTGAGTATGAAACAGTGCATGTTGATGGCTTTAAGGGAGAACATAAGTTGCCTGGGTACCTCAAGTTGCAGCCCTTTGGATTGATGCCTGCAGTACAAGATGGTGATTATACTATTTATGAATCAAGGGCAATAATTAGGTACTTTTCTGAAAAGTACAAAAACCAAGGGACTGATTTGTTGGGGAAGACTATAGAAGAGAGGGGTCTTGTGGAGCAATGGCTTTATGTTGAGGCCCTTAACTATGACCCAGCACTCTACACTTTGGTTATACATGTTTTGGCTAACCCCTTAGTGGGGAAGCCATCTGACCCAAAAGTGATTAAAGAGAGTGAAGAAAAGCTTGGGAAGGTTCTTGACATTTATGAGGAGCAGTTGTCCAAGACAAAGTACTTGGCAGGTGATTACTTCAGCCTTGCTGACCTTAGCCATCTCCCAGTCACTCATTATTTGGTTAATTCAATGGAAAGAGAGTATATGGTTAGGGAAAGGAAACATGTGAGTGCTTGGTGGGATGATATTAGCAACAGGCCATCTTGGAAGAAGGTTCATCAGCTATACACGGCCTTTTTAATTGCTTTTCTGTTTCTATGA | 624 | 0.4167 | MVEKCLIEKEIEYETVHVDGFKGEHKLPGYLKLQPFGLMPAVQDGDYTIYESRAIIRYFSEKYKNQGTDLLGKTIEERGLVEQWLYVEALNYDPALYTLVIHVLANPLVGKPSDPKVIKESEEKLGKVLDIYEEQLSKTKYLAGDYFSLADLSHLPVTHYLVNSMEREYMVRERKHVSAWWDDISNRPSWKKVHQLYTAFLIAFLFL | 207 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aed4g2580 | 207 | SUPERFAMILY | Thioredoxin-like | 3 | 67 | IPR036249 | - | |
| Aed4g2580 | 207 | PANTHER | GLUTATHIONE S-TRANSFERASE RHO | 4 | 198 | - | - | |
| Aed4g2580 | 207 | Gene3D | - | 72 | 193 | - | - | |
| Aed4g2580 | 207 | PANTHER | GLUTATHIONE S-TRANSFERASE | 4 | 198 | - | - | |
| Aed4g2580 | 207 | Pfam | Glutathione S-transferase, N-terminal domain | 5 | 59 | IPR004045 | - | |
| Aed4g2580 | 207 | Pfam | Glutathione S-transferase, C-terminal domain | 103 | 188 | IPR004046 | - | |
| Aed4g2580 | 207 | CDD | GST_C_Phi | 76 | 193 | IPR034347 | - | |
| Aed4g2580 | 207 | SFLD | Glutathione Transferase (cytosolic) | 2 | 187 | IPR040079 | - | |
| Aed4g2580 | 207 | SUPERFAMILY | GST C-terminal domain-like | 64 | 194 | IPR036282 | - | |
| Aed4g2580 | 207 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 1 | 67 | IPR004045 | - | |
| Aed4g2580 | 207 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 74 | 205 | IPR010987 | - | |
| Aed4g2580 | 207 | Gene3D | Glutaredoxin | 1 | 71 | - | - | |
| Aed4g2580 | 207 | SFLD | Main (cytGST) | 2 | 187 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aed4g2580 | Aed-Chr4 | 27730074 | 27730942 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Aed4g2580 | 5 | 198 | Glutathione S-transferase Gene Family | AT2G30870 | 59.794 | 2.39e-85 | 249 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aed4g2580 | K00799 | - | gmx:100809406 | 336.265 |