Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2577 ATGTCATACACTAGTTTCACAATTTTTGCACTTGTGATTCTGATGAATGGCTTACATGCTGCTATAGAATCAAACACAAGCATCACCGCCGGTTCAAATTTGAGCTGGAAGTCAGCCTCGGGTGATTTCGAATTCGGATTCTACGATCTTCCCACTGGTCTTTTTCTTGTCGGAATATGGTTCGGAAGAATCCTCCCCCCAGAGAGAACGCTGGCATGGTACCACCGAAGTCCTCCTGTGGAACCAAACTCTCAAATCCAGTTCACTTCCGCAGGAAACCTTGTGGTTGTGTATCCCAACGGAACCATTGCTCAGATCATATACGGTGATGGTGCTGCATCTTCTGCCAACATGCAAGATGATGGAAACTTTGTCATGGAGAGCTACAACTCAGAAACTGTGTGGCAGAGTTTCCATTCTCCTGCCAACACACTCTTACCTGGCCAAACCTTGCCGAGTACTACTAATAAAGTCCTCTTTTCCAAAGGGAGAGGAGCTTCAAACTACTCATTTGGAGATTTCATGTTACAAATGCTAGACAATGGCAACTTGGTGCTCAAAGCGTACCAGTGGTCAGACCCTGCATACTGGTACAGTTCAACCACAACCCCCAATGCGACTTTGGAGTTCAACGCCACCACCGCTCTCATGCACCTTGTTAGCGCCTCCAGGATCATCCACTCCCTAACCGAAAACACTTCAAACCCAATGCCAATTGAAGACTACTACCACCGCGCCACGCTAGACGAGAATGGAAATTTCCAACAATATGCATATCACAGAAGGAATGGCACCGGGTGGAGGAGGGTTTGGAGAGCCGTGGAGGATCCCTGCAGGGTCAATCTTGTTTGCGGTGTTTACGGCTTGTGCACTTCTCCTGACAATGAATCAGTCAAGTGTGACTGTGTTCCGGGTTACATCCCTTTGGATCATCAAGATGTGTCCAAAGGGTGTCACCCAGAGGCTATAATCAACTACTGTGCTGATAGCAACTTCAAGCTGGAGGTGTTTGAGGACACTGATTTCCAGTTTGATACTAATTTTGTTCGCGAAACTGGGGTTGATTTGGAAGGTTGTATGAAGTTTGTGACGGATGATTGTAACATTGTTGCTGCAACTTACAACGCATCCACCTCCACATGTGCCAAGAAGAGGATGCCCTTGCTCAATGCTAGAAACAGCTCTTCTTCAAAGGGGCAGAGAGCACTGCTTAAAGTTCCATATTATGGGATGGCACATGATAAAACTACCAATAACAAGAGTTTTGATGTAAGAGTCTTTTTGAAGGTTATGCTTGCAGTTGCTGCCACTCTTGCATGTTTCTTTGGTGCACTTGCTGTCTACTATCATCCCTTCACTAAGAGACTAATGAGAAGAAAGAGGTATCTGAATGCAAGCGCTATTGGAATCAACTTCAGAGAATTCACCTTCCAGGAGCTGAATGAGGCAACAGACGGATTCACTACGATTCTTGTGGTATCTATCAGAAGGCAGAGAGAGGTCTCTCTACCTAGCAGTTCTGCACCACCCAATAATAATATACTAGCCAACAATGGGAAAAGGGATGTGATACCTCTATGGAAAGAAGTAGAGTACTACAAGGAGTACCAAAAGAAACTGAGGGCACATCTTGGTGATAAGAAGGGCAATGAGATAATAAGAGAAGCTTTGTATTTGGTAAGCATAGGAACAAATGACTTCCTAGAGAACTACTACACACTCCCAGAGAGAAGGTGTGAATTCCCCATTGTTCAGCAGTATGAGGACTTCCTGATAGGGCTTGCTGAGGGGTTCTTGAAGGAGATTTATGGGCTTGGGGCAAGAAAAATCTCCCTCACTGGCTTGCCTCCTATGGGGTGTCTCCCACTCGAGAGAGCAATTAACGTTTTGGAGTACCATAATTGTGCTGAGGAATACAACAATTTGGCCTTGGAGTTTAATGCCAAGTTGGGGTGGTTGGTCACTAAGCTTAACAAGGACCTCCCTGGCCTTCAATTGGTAGATGCAAATGCTTATGATATCATACTGCAAATCGTTAAACACCCTTCTCGTTTTGGAATGAGGGATGGATCGAAAGAGAAGCAGCGTCAATCCCTCGCCTTCCCAATCCCAAACCCTCTTCTTTCTCTCTGA 2133 0.4552 MSYTSFTIFALVILMNGLHAAIESNTSITAGSNLSWKSASGDFEFGFYDLPTGLFLVGIWFGRILPPERTLAWYHRSPPVEPNSQIQFTSAGNLVVVYPNGTIAQIIYGDGAASSANMQDDGNFVMESYNSETVWQSFHSPANTLLPGQTLPSTTNKVLFSKGRGASNYSFGDFMLQMLDNGNLVLKAYQWSDPAYWYSSTTTPNATLEFNATTALMHLVSASRIIHSLTENTSNPMPIEDYYHRATLDENGNFQQYAYHRRNGTGWRRVWRAVEDPCRVNLVCGVYGLCTSPDNESVKCDCVPGYIPLDHQDVSKGCHPEAIINYCADSNFKLEVFEDTDFQFDTNFVRETGVDLEGCMKFVTDDCNIVAATYNASTSTCAKKRMPLLNARNSSSSKGQRALLKVPYYGMAHDKTTNNKSFDVRVFLKVMLAVAATLACFFGALAVYYHPFTKRLMRRKRYLNASAIGINFREFTFQELNEATDGFTTILVVSIRRQREVSLPSSSAPPNNNILANNGKRDVIPLWKEVEYYKEYQKKLRAHLGDKKGNEIIREALYLVSIGTNDFLENYYTLPERRCEFPIVQQYEDFLIGLAEGFLKEIYGLGARKISLTGLPPMGCLPLERAINVLEYHNCAEEYNNLALEFNAKLGWLVTKLNKDLPGLQLVDANAYDIILQIVKHPSRFGMRDGSKEKQRQSLAFPIPNPLLSL 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2577 710 Gene3D SGNH hydrolase 504 700 IPR036514 -
Aed4g2577 710 SMART blect_4 27 141 IPR001480 -
Aed4g2577 710 Pfam GDSL-like Lipase/Acylhydrolase 515 694 IPR001087 GO:0016788
Aed4g2577 710 Pfam D-mannose binding lectin 76 154 IPR001480 -
Aed4g2577 710 SUPERFAMILY alpha-D-mannose-specific plant lectins 69 202 IPR036426 -
Aed4g2577 710 Gene3D - 141 274 IPR036426 -
Aed4g2577 710 Gene3D - 15 140 IPR036426 -
Aed4g2577 710 PANTHER SERINE/THREONINE-PROTEIN KINASE 9 491 - -
Aed4g2577 710 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 9 491 - -
Aed4g2577 710 Pfam S-locus glycoprotein domain 240 308 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2577 Aed-Chr4 27699708 27708243 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2577 529 706 Pollen Coat Proteome AT1G75910 29.348 2.16e-17 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2577 - - gmx:102662509 752.666