Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2576 ATGGTTACAACTACAAAACTCCTAGTTCTCTTTGTTACTTTCCTTGTATGCTCCAATGTTCTAAGGAAAACTAACTCAATTGAACTAGGTTCCAGCATTGTGGCTGGCAGCAATTCATCTTGGCGATCATCAAATGGTGACTATGCCTTTGGCTTCTACCAACTTCTTAGTGGGCGCTATCTTGTTGGAATTTGGTTTGACAAGGTTCCAAACAAAACACTGGTTTGGTCCGCGAACCGAGACGAACCAGGACCAGTTGAAATTGGATCCACCATCAATCTCACACAAAGTGGGCAGTTTCTGGTCCAACAACCTTACAATGGGGGGACTTCATTTGAAATCTACAACGGAACAAACACAGCTTCCTCTGCGGTTATGCAGGATGATGGGAATTTGGTCTTGAGGGATTCACTTTCAAATTTTATATGGCGGAGCTTTGATTCACCCACGGATACTCTTCTATTAGGCCAAACTTTGAAAATGGGTCAGAAACTCTACTCCAATGCCAATGGATCAGTGGACTACTCAAAAGGGCAATACAGTTTGGAGATCCAACAATCTGATGGAAACATTGTTATCAAAGCTTTCCGGTTCACCGATGCTGCTTATTGGTCGAGTGGAACTAACGGAAACAAAGATGTGAGAATTGTATTTAACAGCACAACAGCTTCTCTTTACGCGGTCAATGCCACCAACCAAATCATACACAACATGACAACAACAACTGATAGAGTCAATGATTATTATTACCGTGTGGCCATCGATGATCGTGGAAGCTTTCAGAAGTGGATTCACAGCAGAGAAAATGGAAGTAGTAGCGGGTGGAGGTCTGTGTGGAACGCGATAGAACGGCCCTGCAGAGTGACTGCACTTTGTGGTGTGTATGGCTTTTGCAATTCATCTGACAGTGAAACCCAACAACAAGCATACAGCTGTGAATGCTTGCCTGGCTATACACATTTGGATCCAAGTGTGCCTTCCAAAGGGTGCTTTCCCAGTGAGGCCAACAATGGCTTGTTGTGTGATGCTTCTGCTTCCAATTCCTCTGATAACTTTGAAGTGAAAGAAATTCAAAATGCTGATATACCAAACAATGATTATTTCTATTTTGATCTACGAGTCATTAACAACATGGATCTTGAAGGCTGCAAGAGGGAACTGATGAATGACTGTCTCTGCATGGCTGCTGTTTTCTATGGCTCTGATTGCTATAAGAAAACATGGCCTATTATAAATGCCATAAGAATCTATCCCGACACTGACAATCATGTGATGCTGGTTAAAGTTCCTCGTCTTCACAATGACATGGAAAATGAAAGCGATTCACGATCTTTGGTTGCTTTGGTAGTGGCTCTTGTCTCTTGTTCTCTACTTGCTGTATTGTTTGCTGCTACTGTTATTTATCACCACCCCATCATTTGTCAGTATCTAATACACAAAGGTGTGCCACCAAAACCAAAGCCAAAGCCTATGGATATCAATCTAAAGGTATTCTCATTCCAACAGCTGAGAGAAGCAACAAATGGATTCAAGGAGAAACTCGGTCGAGGTGCCTATGGCACGGCGTATGGTGGGGTTCTAGACTTGGAGGGTCAACAGGTCGAGGTTGCTGTCAAACAACTGCAGCAAGTAGAAGAGCAAGGTGAGAAAGAGTTTGTAACAGAAGTTCAAGTCATTGCTCTTACTCATCACAGAAACCTTGTTAGGCTATTGGATTGGGTTCTGTATCTGGCAAAAGGAAACAATTTAAGAGCCGCTGTGATTGATGATCTTGAAGTAGAAAGTGATTTCAAACGGTTTGAAAGAATGGCAATGGTTGGATTATGGTGCGTGAATCCCAATTCAACTCTTCGACCATCTATCAAAGTGGTGACACAGATGTTGGAAGGAAATATACAAGTGGGTGTTCCACCACTCAACTGA 1923 0.4264 MVTTTKLLVLFVTFLVCSNVLRKTNSIELGSSIVAGSNSSWRSSNGDYAFGFYQLLSGRYLVGIWFDKVPNKTLVWSANRDEPGPVEIGSTINLTQSGQFLVQQPYNGGTSFEIYNGTNTASSAVMQDDGNLVLRDSLSNFIWRSFDSPTDTLLLGQTLKMGQKLYSNANGSVDYSKGQYSLEIQQSDGNIVIKAFRFTDAAYWSSGTNGNKDVRIVFNSTTASLYAVNATNQIIHNMTTTTDRVNDYYYRVAIDDRGSFQKWIHSRENGSSSGWRSVWNAIERPCRVTALCGVYGFCNSSDSETQQQAYSCECLPGYTHLDPSVPSKGCFPSEANNGLLCDASASNSSDNFEVKEIQNADIPNNDYFYFDLRVINNMDLEGCKRELMNDCLCMAAVFYGSDCYKKTWPIINAIRIYPDTDNHVMLVKVPRLHNDMENESDSRSLVALVVALVSCSLLAVLFAATVIYHHPIICQYLIHKGVPPKPKPKPMDINLKVFSFQQLREATNGFKEKLGRGAYGTAYGGVLDLEGQQVEVAVKQLQQVEEQGEKEFVTEVQVIALTHHRNLVRLLDWVLYLAKGNNLRAAVIDDLEVESDFKRFERMAMVGLWCVNPNSTLRPSIKVVTQMLEGNIQVGVPPLN 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2576 640 ProSiteProfiles Protein kinase domain profile. 508 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g2576 640 Gene3D - 19 148 IPR036426 -
Aed4g2576 640 SUPERFAMILY Protein kinase-like (PK-like) 486 576 IPR011009 -
Aed4g2576 640 ProSitePatterns Protein kinases ATP-binding region signature. 514 539 IPR017441 GO:0005524
Aed4g2576 640 Gene3D - 149 287 - -
Aed4g2576 640 Pfam D-mannose binding lectin 73 163 IPR001480 -
Aed4g2576 640 Gene3D Phosphorylase Kinase; domain 1 483 580 - -
Aed4g2576 640 Pfam Protein tyrosine and serine/threonine kinase 510 575 IPR001245 GO:0004672|GO:0006468
Aed4g2576 640 PANTHER SERINE/THREONINE-PROTEIN KINASE 7 571 - -
Aed4g2576 640 ProSiteProfiles Bulb-type lectin domain profile. 18 147 IPR001480 -
Aed4g2576 640 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 209 IPR036426 -
Aed4g2576 640 Pfam S-locus glycoprotein domain 223 319 IPR000858 GO:0048544
Aed4g2576 640 SMART blect_4 32 149 IPR001480 -
Aed4g2576 640 Coils Coil 527 547 - -
Aed4g2576 640 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 7 571 - -
Aed4g2576 640 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 570 639 - -
Aed4g2576 640 PANTHER SERINE/THREONINE-PROTEIN KINASE 570 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2576 Aed-Chr4 27696326 27698755 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2576 426 573 Receptor kinase-like Gene Family AT3G55550 35.526 3.05e-14 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Aed4g2576 PK_Tyr_Ser-Thr 1.1e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2576 - - gmx:100779807 863.603