Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2564 ATGTCATCAAACAGTACATTGCATGGGAAATTATCGAAGAGGATTTCATTTTTGGGATTGAAATTATGGGTTTTGATTGGGATAGGTGTTGGTGCTTTTATAGTTGTGATTCTTTGTCTATTATCTGTATGGGTGATGTTTCGGAGAAAGTCTAGGAGATCTCTGGACAAGTATTCTTTGTCCCAAATTCCACATGTCTCAAAGGACATCAAAGTTGACAAGGTTGGGGTGCAGAGTTCTCATGATCAAGCAGATAGTGTGGCTATTCCTGTTCATGACAAACCAAGTGAGAACAATTCAGACAAGTTGTTAGTTCATTTGCACAAGAGCAAATCCGACGATGCTGATAATATCAGTCAGTGCAGCTCAGTTTATCATCATGAGAGAGGATTTAGTTCAATGTCGGGGGAAGATGGAAGCTCTGGGACTGTTAAGAAGAAGTCTACGTTGTCATTAGGAGGAATGGTAACTGCATCTCCTCTTGTTGGCTTGCCAGAATTTTCTCATCTTGGGTGGGGCCACTGGTTCACACTTAGAGATCTGGAACTTGCAACTAGTCGCTTCTCTCCAGAGAATGTGATTGGCGAGGGTGGATATGGGGTTGTTTACAAGGGAAGATTGATCAATGGATCCGATGTGGCGGTGAAGAAAATTCTTAACAACATGGGACAAGCAGAGAAGGAATTCAGAGTTGAAGTAGAGGCTATTGGCCATGTTAGACATAAAAATCTTGTGCGCTTACTTGGTTATTGCGTAGAAGGAGTTCACAGGTTGCTGGTGTATGAATATGTCAACAATGGTAACTTAGAACAATGGTTACATGGGGCTATGAGCCAACAAGGGACACTTACCTGGGAAGCTCGGATGAAAGTTATCACTGGCACAGCCAAAGCTTATGTGGCACCAGAATATGCTAATACAGGTTTGTTAAATGAGAGGAGTGACATTTACAGCTTTGGTGTTCTCCTGCTAGAAGTAGTTACTGGAAGGGATCCTGTGGACTACACACGCCCTGCTAACGAGGTGAATCTTGTTGAATGGCTCAAGATAATGGTGGGAACAAGGAGAGCTGAGGAAGTTGTGGACTCAAGGCTTGAAGTGAAACCATCAATACGTGCTTTAAAGCGTGCTCTTCTTGTTGCTCTTAGATGTGTTGATCCCGAATCAGAAAAGAGGCCCAAAATGAGTCAGGTTGTGAGGATGCTTGAAGCTGATGAATATCCATTCCGAGAGGATCGGAGAAATAGAAAGAGCCGTACCGTGAGCATGGAAATTGAATCTCTGAAGGATATTTCTGGTCCATCTGATGCTGAAAAATTGAAGGGTTCTGAAGGCTATGCACCAGAACCAGAAAGAACTCAAGGGTAG 1368 0.4306 MSSNSTLHGKLSKRISFLGLKLWVLIGIGVGAFIVVILCLLSVWVMFRRKSRRSLDKYSLSQIPHVSKDIKVDKVGVQSSHDQADSVAIPVHDKPSENNSDKLLVHLHKSKSDDADNISQCSSVYHHERGFSSMSGEDGSSGTVKKKSTLSLGGMVTASPLVGLPEFSHLGWGHWFTLRDLELATSRFSPENVIGEGGYGVVYKGRLINGSDVAVKKILNNMGQAEKEFRVEVEAIGHVRHKNLVRLLGYCVEGVHRLLVYEYVNNGNLEQWLHGAMSQQGTLTWEARMKVITGTAKAYVAPEYANTGLLNERSDIYSFGVLLLEVVTGRDPVDYTRPANEVNLVEWLKIMVGTRRAEEVVDSRLEVKPSIRALKRALLVALRCVDPESEKRPKMSQVVRMLEADEYPFREDRRNRKSRTVSMEIESLKDISGPSDAEKLKGSEGYAPEPERTQG 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2564 455 MobiDBLite consensus disorder prediction 431 446 - -
Aed4g2564 455 Pfam Protein tyrosine and serine/threonine kinase 191 296 IPR001245 GO:0004672|GO:0006468
Aed4g2564 455 MobiDBLite consensus disorder prediction 409 455 - -
Aed4g2564 455 ProSiteProfiles Protein kinase domain profile. 188 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g2564 455 SUPERFAMILY Protein kinase-like (PK-like) 172 404 IPR011009 -
Aed4g2564 455 ProSitePatterns Protein kinases ATP-binding region signature. 194 217 IPR017441 GO:0005524
Aed4g2564 455 Gene3D Transferase(Phosphotransferase) domain 1 296 421 - -
Aed4g2564 455 PANTHER OS01G0323000 PROTEIN 298 449 - -
Aed4g2564 455 PANTHER RECEPTOR-LIKE KINASE PLANT 298 449 - -
Aed4g2564 455 PANTHER RECEPTOR-LIKE KINASE PLANT 2 298 - -
Aed4g2564 455 PANTHER OS01G0323000 PROTEIN 2 298 - -
Aed4g2564 455 MobiDBLite consensus disorder prediction 409 424 - -
Aed4g2564 455 Gene3D Phosphorylase Kinase; domain 1 169 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2564 Aed-Chr4 27578544 27583908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2564 169 403 Receptor kinase-like Gene Family AT4G02010 35.135 4.11e-49 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Aed4g2564 PK_Tyr_Ser-Thr 2.8e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2564 - - ini:109156125 610.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2564 4 27578544 27583908 Aed4g2564 4 27578544 27583908 ECH
Aed4g2564 4 27578544 27583908 Aed3g2441 3 27131682 27136899 PCT
Aed3g1821 3 22686939 22690771 Aed4g2564 4 27578544 27583908 PCT