Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2557 ATGTGGGATCTCAATTGGGTTCTATGTTTGTTGAATAAGGGTTTGGGGGAGGGCAGAATAAGCTGGGATTGTTGTGGCTTTGTGATAATGAGCAGGGGTAGGTGGGGGAAATGTGGACTTTACAATTCTAACTTGACTGGTTTTGCTATGTGGAATATGCTACAGAGTTCAGCGGAGATGGATTTTTTCTCTGAATATGGTGATGCCAACCGGTACAAAATTCAAGAAGTCATTGGGAAGGGAAGTTATGGTGTTGTCTGTTCAGCCATTGACACTCATACTGGTGAAAAAGTGGCAATTAAGAAGATTCATGACATCTTTGAGCATATATCTGATGCTGCTCGTATTCTCCGTGAGATAAAGCTGCTTAGACTTCTACGACATCCTGACATTGTTGAAATAAAACACATTATGCTGCCTCCGTCAAGGAAGGACTTTAAAGATATTTACGTTGTCTTTGAGCTCATGGAGTCTGATCTTCATCAAGTCATTAAAGCCAATGATGACTTGACAAAAGAACATTATCAGTTTTTTCTTTATCAATTACTTCGAGCACTGAAGTACATTCACACCGCAAATGTCTATCATCGAGATTTGAAGCCCAAGAATATACTGGCAAATGCAAACTGTAAGCTTAAAATCTGTGATTTTGGGTTAGCTAGAGTTGCCTTTAGTGACACACCAACAACTATATTTTGGACGGATTATGTTGCTACAAGGTGGTATAGAGCTCCAGAGCTATGTGGATCATTTTACTCGAAGTATACACCAGCAATTGATATATGGAGTATAGGTTGTATATTTGCTGAAGTGCTAACAGGAAAGCCACTTTTTCCTGGGAAAAATGTAGTCCATCAATTGGATCTGATGACAGATCTGCTTGGGACACCTTCACTGGATACAATATCACGGGTACGTAATGAGAAGGCACGGCGATACCTAACTAGCATGAGGAAAAAGCAGCCTGTGCCTTTTGCTCAAAAATTTCCCAATGCAGACCCTTTAGGCCTTAGGCTACTGGAAAGGTTGTTGGCTTTTGATCCAAAAGACCGACCTACTGCTGAAGAGGCTTTGGCTGATCCTTACTTCAAGGGACTGGCAAAAGTTGAGAGGGAACCATCCTGCCAACCTATCACAAAAATGGAATTTGAATTTGAAAGACGAAGAGTCACAAAGGAAGAAATTCGAGAGCTGATTTTCCGTGAGATTCTAGAGTATCATCCTCAACTATTGAAAGACTACATGAATGGAACAGAGAGAACTAATTTTCTTTATCCAAGTGCTGTTGATCAATTCAGAAAGCAGTTTGCTCATCTAGAGGAAAATGGTAAAAATGGTCCTGTTATGCCACTTGATAGAAAGCATGTTTCTCTTCCAAGGTCAACAATTGTACATTCAAATACTACAGTACACCATAAAGAGCCAACAAATATTGCTTCCAGCAAAAACCGGCCAACAGCTGAGGAATATAACAAAAACCCCAGAGATTCAGAAATTCCAGTGCCAAGGTCAATGCAGGGACCACAAAGAATTCCACTAGCAAAACCTGGTAAAGTTGTTGGGCCCGTTGTTCCATACGAGTATGGTAACATCGTCAAGGATTCATATGATCCTAGGTCATTTATTAGAGGTTCTGTGCTTCCCACACAAGCTGTTCCGCCAGCATACTATTATCAAAGATCCAGCACTGGAAACCAAGAAAGGCCAGCAACAGAAGCTGACAAGAGTGTGCCTTTACAGGCTAAACATGCACAACAATGTGGGGTTAATGCCAAGATGGCACCGGACATAGCTATCAATATTGATACAAATCCCTTTTTTATGACAAGGGCAGGAGTTAACAAGTTAGAGCAAGGTGATCAAATAGCCATAGAAGCAAACTTGCTGCAGCCAAAGGCACATCAATATGGTGGGATCAGTGCTGCAGCTGGGGCCAACGCTCATAGAAAGGTTGGGCCTGTTCAGTATGGTATGACAAGAATGTTCTAG 1989 0.4143 MWDLNWVLCLLNKGLGEGRISWDCCGFVIMSRGRWGKCGLYNSNLTGFAMWNMLQSSAEMDFFSEYGDANRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRKDFKDIYVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTIFWTDYVATRWYRAPELCGSFYSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNEKARRYLTSMRKKQPVPFAQKFPNADPLGLRLLERLLAFDPKDRPTAEEALADPYFKGLAKVEREPSCQPITKMEFEFERRRVTKEEIRELIFREILEYHPQLLKDYMNGTERTNFLYPSAVDQFRKQFAHLEENGKNGPVMPLDRKHVSLPRSTIVHSNTTVHHKEPTNIASSKNRPTAEEYNKNPRDSEIPVPRSMQGPQRIPLAKPGKVVGPVVPYEYGNIVKDSYDPRSFIRGSVLPTQAVPPAYYYQRSSTGNQERPATEADKSVPLQAKHAQQCGVNAKMAPDIAINIDTNPFFMTRAGVNKLEQGDQIAIEANLLQPKAHQYGGISAAAGANAHRKVGPVQYGMTRMF 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2557 662 ProSitePatterns Protein kinases ATP-binding region signature. 78 102 IPR017441 GO:0005524
Aed4g2557 662 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 56 538 - -
Aed4g2557 662 SUPERFAMILY Protein kinase-like (PK-like) 68 367 IPR011009 -
Aed4g2557 662 SMART serkin_6 72 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g2557 662 ProSitePatterns MAP kinase signature. 107 210 IPR003527 GO:0004707|GO:0005524|GO:0006468
Aed4g2557 662 MobiDBLite consensus disorder prediction 472 513 - -
Aed4g2557 662 Gene3D Transferase(Phosphotransferase) domain 1 158 386 - -
Aed4g2557 662 Gene3D Phosphorylase Kinase; domain 1 87 409 - -
Aed4g2557 662 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 56 538 - -
Aed4g2557 662 ProSiteProfiles Protein kinase domain profile. 72 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g2557 662 CDD STKc_TDY_MAPK 71 408 - -
Aed4g2557 662 MobiDBLite consensus disorder prediction 472 487 - -
Aed4g2557 662 Pfam Protein kinase domain 72 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2557 Aed-Chr4 27518571 27524765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2557 52 475 MAP Kinase Gene Family AT2G42880 89.412 0.0 782
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Aed4g2557 Pkinase 2.7e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2557 - - gmx:100811788 1169.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2557 4 27518571 27524765 Aed3g2450 3 27181509 27188875 PCT