Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2550 ATGGCTGCAACCTTTGCTTCCAGATGTTCTCGTGTGGGTCGTTCTCTGTTTGGTGGATTAAGCAACAATTCCCCTGGTTTACTTACCTCATCACATGACATGACATGCAACAATTTGTTTTCTCAGCAACAACGCACCTTCATACAGATGAGGACTGTTCTCAAGGTTGTGGATAACTCTGGTGCTAAAAAGGTGATGTGCATACAGGCATTGAAAGGGAAGAAAGGAGCAAGATTAGGTGATACAATAATAGCATCCGTGAAGGAGGCACATCCTAATGGAAAAGTGAAGAAAGGAAAGGTTGTTTATGGTGTAGTTGTGCGTGCAGCAATGCCAAGGGGTCGTTGCGATGGCAGTGAGGTCAAGTTTGATGATAATGCTGTGGTGCTTGTTGACAAGCAAGGCCAGCCTATTGGAACCAGAGTTTTTGGACCAGTGCCTCATGAGCTGAGGCAAAAGAAGCATGTCAAGATTCTTACTTTGGCAGGGCACATTGCATAA 501 0.4491 MAATFASRCSRVGRSLFGGLSNNSPGLLTSSHDMTCNNLFSQQQRTFIQMRTVLKVVDNSGAKKVMCIQALKGKKGARLGDTIIASVKEAHPNGKVKKGKVVYGVVVRAAMPRGRCDGSEVKFDDNAVVLVDKQGQPIGTRVFGPVPHELRQKKHVKILTLAGHIA 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2550 166 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 19 166 IPR000218 GO:0003735|GO:0005840|GO:0006412
Aed4g2550 166 Hamap 50S ribosomal protein L14 [rplN]. 47 166 IPR000218 GO:0003735|GO:0005840|GO:0006412
Aed4g2550 166 Pfam Ribosomal protein L14p/L23e 48 165 IPR000218 GO:0003735|GO:0005840|GO:0006412
Aed4g2550 166 Gene3D Ribosomal protein L14 47 166 IPR036853 GO:0003735|GO:0005840|GO:0006412
Aed4g2550 166 TIGRFAM rplN_bact: ribosomal protein uL14 48 165 IPR005745 GO:0003735|GO:0006412|GO:0015934
Aed4g2550 166 SMART Ribosomal_L14_2 47 166 IPR000218 GO:0003735|GO:0005840|GO:0006412
Aed4g2550 166 ProSitePatterns Ribosomal protein L14 signature. 104 130 IPR019972 -
Aed4g2550 166 SUPERFAMILY Ribosomal protein L14 48 165 IPR036853 GO:0003735|GO:0005840|GO:0006412
Aed4g2550 166 PANTHER 50S RIBOSOMAL PROTEIN HLP, MITOCHONDRIAL-LIKE ISOFORM X1 19 166 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2550 58 149 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 37.374 1.75e-10 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2550 K02874 - gmx:100527495 295.819