Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2533 ATGATCTCCTATTTGAGACAGCCTGTTGTAGGGATCAGTGGTTCTGATCTTCTTTTGAGGCAGAGACATGCAACCCCAATTAAGGCAGGGTCCTTTTTACCCTCTTTGTCAAGAGAGAAGGATCAGAGATCTCTTGTTTCAGTGCAAAAGCCACTGCATATTGTTGCTTCTCTTGGTGTTGGAAATTTTGTGTCAGTGAAGAGTGATAAAAGGGGTGATTTGGTGAAGTGTGAGGCCTATGAGGCAGACAGATCAGAGGTTGAGGGTGCAGCAAGCACACCATCAGAGGCTGCAAAGAAGGTGAAAATTGGGATATATTTTGCAACCTGGTGGGCTCTGAATGTGGTGTTCAATATTTATAACAAGAAGGTTTTGAATGCCTACCCTTACCCTTGGCTTACTTCAACTCTCTCACTTGCATGTGGGTCTCTTATGATGCTGATCTCTTGGGCCACTGGGATTGCAGAAGCCCCCAAGACCGATCCTGAGTTTTGGAAGTCTTTGTTCCCTGTTGCTGTTGCACATACAATAGGACATGTAGCAGCAACAGTTAGTATGTCAAAAGTTGCGGTATCATTTACACATATTATCAAGAGTGGTGAACCTGCTTTTAGTGTTCTGGTTTCAAGATTTCTTTTGGGTGAGAGCTTCCCTATGCCAGTCTATCTGTCGTTAGTTCCAATCATCGGTGGATGTGCACTTGCTGCTGTGACTGAGCTCAATTTCAATATGATTGGTTTTATGGGGGCTATGATATCGAATTTGGCTTTTGTATTCCGTAATATCTTTTCGAAAAAGGGCATGAAGGGAAATTCTGTCAGTGGAATGAATTACTATGCTTGTTTATCTATTTTGTCCCTTGCCATTCTCACACCTTTCGCAATTGCTGTCGAAGGACCACAGATGTGGGCTGCTGGATGGCAAACAGCCATGTCTCAAATTGGACCCCAATTCATATGGTGGGTAGCTGCTCAAAGTGTATTCTATCATCTATACAATCAGGTGTCATACATGTCTCTGGATCAGATCTCTCCCTTGACATTTAGCATTGGAAACACCATGAAACGTATATCTGTCATCGTATCTTCCATTATTATCTTCCACACACCAGTTCAACCCATCAATGCTCTTGGTGCCGCCATTGCTATCCTTGGAACCTTCTTGTATTCACAGGTGGTTCATAAGGTGGAGTTGGTTACCAATGTGCCTCATGTTTTGCCTTCCCATCGGATGGATGCTATTCTGAAGTTAGGTGATCTGGTGCAAAACTATAGAGTTGGGGAACTAAGATTCCCCCATGGACTTGTTTGTTGTTACTATTCTTCATGCTCAACCAGGGACAAGGAAAGTTGA 1353 0.4331 MISYLRQPVVGISGSDLLLRQRHATPIKAGSFLPSLSREKDQRSLVSVQKPLHIVASLGVGNFVSVKSDKRGDLVKCEAYEADRSEVEGAASTPSEAAKKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATGIAEAPKTDPEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGESFPMPVYLSLVPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGNSVSGMNYYACLSILSLAILTPFAIAVEGPQMWAAGWQTAMSQIGPQFIWWVAAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQVVHKVELVTNVPHVLPSHRMDAILKLGDLVQNYRVGELRFPHGLVCCYYSSCSTRDKES 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2533 450 Pfam Triose-phosphate Transporter family 102 390 IPR004853 -
Aed4g2533 450 SUPERFAMILY Multidrug resistance efflux transporter EmrE 145 237 - -
Aed4g2533 450 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 102 395 IPR004696 GO:0016021|GO:0022857|GO:0055085
Aed4g2533 450 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 27 392 - -
Aed4g2533 450 PANTHER SOLUTE CARRIER FAMILY 35 27 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2533 Aed-Chr4 27260225 27265417 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2533 37 391 Antiporters AT5G54800 80.886 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2533 K15283 - gmx:100801832 721.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2474 3 27312682 27314936 Aed4g2533 4 27260225 27265417 ECH
Aed4g2533 4 27260225 27265417 Aed4g2533 4 27260225 27265417 ECH
Aed4g2533 4 27260225 27265417 Aed3g2474 3 27312682 27314936 PCT