Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2513 ATGGACAAAAATATGTTACTCTTTGTTCTTTTAGCTTTTCCCATCTTGCTACTATTTGTCTTCAGAAAACACAAAAAATCATCTAAGCCAACCTTACCACCAGGCCCTAAAGGCCTTCCCTTCATTGGCAATCTGCATCAACTACTCGACAGCTCTACTCTTTGTTTGAAACTCTATGAACTCTCGAAAAACTATGGTCCCATATTCTCCCTTCAACTGGGTTCAAGGTCAGCCCTAGTTATTTCCTCACCAAAACTCGCCAAAGAGGTGATGAAAACCCATGACCTTGAGTTCTGTGGCCGACCCTCACTCATAAGCTCAATGAAATTCTCATATAACGGCCTAGACATGGCGTTTTCGCCCTACAGAGACTACTGGAGACACACCAGAAAAATCTCCATCATCCACTTCCTCAGTCTTAAGCGCGTATTATCGTTTTCCTCGACAAGAAAACACGAGGTTATTCAGCTCGTAAGAAAGATAACAGAACACGCTTCTAGCTCCAAGGCTTCCGACATGCACGAGCTGCTGACGTGCCTAACGAGCGCGATCGTGTGCAGGACTGCCTTGGGGAGAAGGTACGAGGAAGAAGGGACCGAGACGAGCATGTTCCATGGCCTGCTTAAAGAGGCGCAGTATTTGATAGCTTCCACGTTCTACACTGATTATATTCCTTTTATTGGGGAAGTGGTTGATAAACTCACTGGCTTGATGGGTCGTCTTGAGAATATGTTCAATGTGTTGGATGGGTTTTATCAGAATGTTATTGATGAACACCTTGATCCTCAAAGGGAGAAACTCACGGATGAAGAGGATATAATTGATGCCTTGCTTCAACTTAAGAATGATCCTTCATTCTCCATGGATCTCACTCCTGCTCACATCAAACCCTTGATTATGAATATAATTTTGGCAGGGACAGACACAAGTGCAGCTGCAATAGTTTGGGCCATGACAGCCCTAATGAAAAGCCCTAGAGTAATGAAGAAAGCCCAAGAAGAGATTAGAAAAGTGTTTGTTGGTGATCAGAAAGATTTTATAGAGGAAGATGATATTGAAAAGCTTCCTTATCTTAAGGCAGTTATAAAAGAAACAATGAGAATGTATCCACCACTGTCTCTGCTTATACATAGGGAAACTATTAAAAAGTGTAGCATTGAAGGGTACGAAATTCCAGAGAAGACACTAGTGTATGTGAATGCTTGGGCAATGCATAGAGACCCAGAAACATGGGAGAAGCCAGAAGAGTTTTGTCCTGAGAGGTTCATAGACAGCAAAATAGATTTTAGGGGCTATGATTTCGAGTTGATTCCATTTGGTGCTGGCAGAAGGGTTTGCCCTGGGATACACATGGGAATTATCACAGTGGAACTTGTGCTTGCTAATCTTCTCTATTCATTTGATTGGGAAATGCCTCAAGGGATGAAAAGGGAGGACATAGACACTGATATGCTTCCTGGACTTGTCCAACACAAGAAAAATCCACTATGCCTAGTTGCTAAGAAGAGAGGGTGA 1515 0.4271 MDKNMLLFVLLAFPILLLFVFRKHKKSSKPTLPPGPKGLPFIGNLHQLLDSSTLCLKLYELSKNYGPIFSLQLGSRSALVISSPKLAKEVMKTHDLEFCGRPSLISSMKFSYNGLDMAFSPYRDYWRHTRKISIIHFLSLKRVLSFSSTRKHEVIQLVRKITEHASSSKASDMHELLTCLTSAIVCRTALGRRYEEEGTETSMFHGLLKEAQYLIASTFYTDYIPFIGEVVDKLTGLMGRLENMFNVLDGFYQNVIDEHLDPQREKLTDEEDIIDALLQLKNDPSFSMDLTPAHIKPLIMNIILAGTDTSAAAIVWAMTALMKSPRVMKKAQEEIRKVFVGDQKDFIEEDDIEKLPYLKAVIKETMRMYPPLSLLIHRETIKKCSIEGYEIPEKTLVYVNAWAMHRDPETWEKPEEFCPERFIDSKIDFRGYDFELIPFGAGRRVCPGIHMGIITVELVLANLLYSFDWEMPQGMKREDIDTDMLPGLVQHKKNPLCLVAKKRG 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2513 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Aed4g2513 504 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2513 504 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2513 504 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2513 504 Gene3D Cytochrome P450 24 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2513 504 Pfam Cytochrome P450 33 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2513 504 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2513 504 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2513 504 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2513 504 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2513 504 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2513 504 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2513 504 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2513 504 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2513 504 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2513 504 PANTHER CYTOCHROME P450 71B11-RELATED 4 502 - -
Aed4g2513 504 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 4 502 - -
Aed4g2513 504 SUPERFAMILY Cytochrome P450 33 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2513 Aed-Chr4 27133725 27135948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2513 6 502 Cytochrome P450 AT4G31500 46.400 5.82e-160 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2513 - - gmx:100798287 887.486