Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2498 ATGCAAGGGAAAGGAGAAGGAAGATCACTTGGCACATTGTTTCAAAACATGAAAGTAGCACGTCAACTGAGCAACCTAATTCCCAACAAAAACATTTTGGAGGATCTCAAGAATGACCTCAAGAATCTTCAAGACCAAAGACAAAGGGTGCAAGAGAATATCACTTGGGACTCTGATGAATTCCAGATTCAAAGTAGCTGGTTAAAAAATGTTGACGAGATTGCTGGAAAAGTGGATGTATTCTTGAGGTACTATGAAGGCCAAAGTACTTGCACAAATTTCTTGTGGCGGTACAAGCTTGGTAAAAAATCAAGTAAGATGCAACAAGAAATTTCAAAATTGTATGAAGAGGGAAAATCTCATCTATCTGTGAAACCAACAAAAGATTACAAGGTCCCAAAATCAAGAAGTGATACCATCAATGACATTATGGAAGCCCTAAAGGACCCTCATATCCGAGATGTTGGAGTATGGGGGTTGGGTGGTGTAGGCACAACCTCAGTAGCCAACCATATTAAAGGGCAAGCAAAAAAAGATCAATTATTCAATGCAGTGATTTTAATAACTGTAACTAAGAAGCCAGATGTGGAAAAAGTTCAAGAAGTTATTGCAAATGAATTGGAGGTGCAGTTCAATGAGGAAACACTTGTGAAAAGAAGAAACAAATTGCGTCAGAGAATAAAGAATGAGAAGAACACTCTTGTCATAGTTGATGATACGTGGGGGGAATTGAAGCCACAAGAATTTGACTTAGAGGAATTTGGAGTTCCTTTGGGCGAGGAGCATGCAGGCGGCAAGTTACTGTTGACATCAGGAAACTTGAATTTCATACAAAATTTTAAGGGTGCACCTAAGCCTAAGGTGTTTCAATTAGAAAAATTAGAAGAAAATGAGGCTCAGACCTTGTTTGAGAAGATGGTTGAAGTTGCTGCTCAAGATAGTGATGAGGCAAGTTCCATTGCTAGAGAAATATTGAAAAGTTGTGAAGGTTCAGCCTCTTCATTTTTTGCCATAGCAAAGACATTAAGAAATAAGGGCAAAGAGGCCTGGCAAGAGGCCTTGGTGAAGTTGAAGGAAGAAAGGGTTTCACCAATAAAACTATTGTCCAATAGTTTAGAAAGGGAACACGGGTCATTGTTCTTGCTTCTTACTATTCGGGGCAGAAGGGCCATCAACAAGTATAGCATATATATAGACATGTGGACAGGTTTGTTCAAAAATCTTGAAACAGCAGATGCAGCAAGAACTAGGCGTGATTCACTGATTAGTGATCTGAAGTCCTATGGTCTTCTGGTTGAAGATGAAAAGCAAAATGTGAAAATAAATGAATTCATATGGCACACTGCTTACTCAATAGCTCAAAATGATTTAAAAGCTTTATTGATTTACAGAGAATGGCCATCAGAAGATGTGCTAAAAGGTCTACGCTTCTACAACATCAACACAGTGAGTGGTTTGGAGATTCCTGAAAGATTGGAATGTCCAAACTTGCAACAGCTTGTGATTAGTGCAGACAGTCCCTCAATGAATGTTTCAGATTCCTTTTTTGAGGAGACTAAGCATCTGAAAGTCCTAAACTTTGTTGGCTTTCATTGTTCAAAGCTTCCAAATAGTTTTGTTTATTTAAAGAACCTTGAAGCATTATACATGTCCAAATGCAAATTGGTAGATATTACCAAAGTTTGTGAGCTCACAAACTTAAGAGTACTTACCCTCTTTGAAAGTATTATCCAACAATTGCCTGCACAAATTGGTCAGCTTCAGAAGTTGCTATTCTTAGATTTAAGAGATACAAAACTCCAAGTGATTCCACCCAATGTTCTGTCCAAGTTGGCAAGCTTAGAAGAATTATATTTGAGAAACTCCTTTTGTAATTGGGAGATTGAAATATCTACCAATGAAAACAAGAATGCAAGCTTGAAAGAGCTTACAAACTTGGATAACTTGGTATGTATAGAAGACTTGTATGTTCCTAATCCTCAGGCGTGGCCGGTGGACTTGTTCTTTGGAAAGCTAAGATCATACACAATTTTCATTGGAGATGGGTGGGGTCAAACACATGACGGTGATCGTGGATTAAAGACATTGAAACTGAAGCTCAACAATAGAAGGTTTCAGTCAGAGGATGGAATCAAAAAGATGGTGAAAAATGTTGATGTTTTGTACCTTGATGAACTGAATGGTGTCCAGAATGTTCTTAGTGATTTGGATTGTGATGCATTTCCTCATCTGCAGTCTCTCTTTATACAAAACAATGCTGAAATCAAATGCATAGCCACAGGATCAAGTCATGATGATCCTCTTGATGCTTTCCCCAACTTGGAGTCTCTCTCACTCAACAATCTAATCAATTTGGAGGACATATGCCATGGTGGTTCTTTAACTGAGAAGTCTTTCTTCAAACTAAGAGTCATCAAAGTAAAGAACTGCAATGCAATGGGATATCTCTTCTCAAAATCAATGGTCAAAGGCCTTCCTCATCTTGCTAATGTGGAAGTTAAAGAGTGCAAATCCATAAAGGCAATTGTGCTTATGAAAGGGGAAGAGAATCCTCCCATAGTTTCTTGCCCTAATATGGAAACAATGGTGATTTCCCAAGTTAGTGAATTGACAACAATATGGAATGAGGGATATGATGTTGAAGAATCATTTTGGAAACTGAAAAATGTAAACATAACAAATTGTGAGAAATTGAGGACTGTCTTTCCGGTTAATATTTCAAAAAATCTTCATAATTTGAAGATATTAGATGTTAGAGATTGCAAATCAATGACAAGTATTTTTACTGTGATGAGGCAAGATAACAAGCAACCAGGACTTCAATTGAGCATTCCAATGATTTATATAAATTTAATTCGCCTGCCAAAATTGGAGTATGTGTGTGTTACTGCTGGATTTGAATCTCTGAAGAAAAAGTTTGAGGAAGAATGGCAGGTTGGCATTTCCACTTTACCAGCTAGTATTCGTGCTGAAAGTGAAAAAAAGATGAAAAAGTATTTGGAAGAGTATTTAAATATGTAG 3021 0.3744 MQGKGEGRSLGTLFQNMKVARQLSNLIPNKNILEDLKNDLKNLQDQRQRVQENITWDSDEFQIQSSWLKNVDEIAGKVDVFLRYYEGQSTCTNFLWRYKLGKKSSKMQQEISKLYEEGKSHLSVKPTKDYKVPKSRSDTINDIMEALKDPHIRDVGVWGLGGVGTTSVANHIKGQAKKDQLFNAVILITVTKKPDVEKVQEVIANELEVQFNEETLVKRRNKLRQRIKNEKNTLVIVDDTWGELKPQEFDLEEFGVPLGEEHAGGKLLLTSGNLNFIQNFKGAPKPKVFQLEKLEENEAQTLFEKMVEVAAQDSDEASSIAREILKSCEGSASSFFAIAKTLRNKGKEAWQEALVKLKEERVSPIKLLSNSLEREHGSLFLLLTIRGRRAINKYSIYIDMWTGLFKNLETADAARTRRDSLISDLKSYGLLVEDEKQNVKINEFIWHTAYSIAQNDLKALLIYREWPSEDVLKGLRFYNINTVSGLEIPERLECPNLQQLVISADSPSMNVSDSFFEETKHLKVLNFVGFHCSKLPNSFVYLKNLEALYMSKCKLVDITKVCELTNLRVLTLFESIIQQLPAQIGQLQKLLFLDLRDTKLQVIPPNVLSKLASLEELYLRNSFCNWEIEISTNENKNASLKELTNLDNLVCIEDLYVPNPQAWPVDLFFGKLRSYTIFIGDGWGQTHDGDRGLKTLKLKLNNRRFQSEDGIKKMVKNVDVLYLDELNGVQNVLSDLDCDAFPHLQSLFIQNNAEIKCIATGSSHDDPLDAFPNLESLSLNNLINLEDICHGGSLTEKSFFKLRVIKVKNCNAMGYLFSKSMVKGLPHLANVEVKECKSIKAIVLMKGEENPPIVSCPNMETMVISQVSELTTIWNEGYDVEESFWKLKNVNITNCEKLRTVFPVNISKNLHNLKILDVRDCKSMTSIFTVMRQDNKQPGLQLSIPMIYINLIRLPKLEYVCVTAGFESLKKKFEEEWQVGISTLPASIRAESEKKMKKYLEEYLNM 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2498 1006 Pfam NB-ARC domain 138 368 IPR002182 GO:0043531
Aed4g2498 1006 PANTHER PHOSPHATASE, PUTATIVE-RELATED 19 844 - -
Aed4g2498 1006 PRINTS Disease resistance protein signature 227 241 - -
Aed4g2498 1006 PRINTS Disease resistance protein signature 154 169 - -
Aed4g2498 1006 PRINTS Disease resistance protein signature 908 924 - -
Aed4g2498 1006 Gene3D - 113 285 IPR027417 -
Aed4g2498 1006 Gene3D Ribonuclease Inhibitor 687 962 IPR032675 -
Aed4g2498 1006 Gene3D - 293 384 IPR042197 -
Aed4g2498 1006 PANTHER - 19 844 - -
Aed4g2498 1006 Gene3D Ribonuclease Inhibitor 385 661 IPR032675 -
Aed4g2498 1006 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 129 380 IPR027417 -
Aed4g2498 1006 Pfam Leucine rich repeat 566 621 IPR001611 GO:0005515
Aed4g2498 1006 SUPERFAMILY L domain-like 467 928 - -
Aed4g2498 1006 Coils Coil 29 53 - -
Aed4g2498 1006 Coils Coil 213 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2498 Aed-Chr4 27047259 27051020 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2498 152 446 WRKY Transcription Factor Family AT5G45050 23.659 3.38e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2498 - - aprc:113854183 1089.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2498 4 27047259 27051020 Aed4g2498 4 27047259 27051020 ECH