Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2484 ATGCGTAAACCCTCCTACACGTTCTTCATACAGTTCTTGTTTGCTTCTCAAGTCTCTCGAATCCTCTTTCCTTCTAAGAATAAGCAAAGTACTTACATGGTTGAGTTGGAAATCCAGGTGGCAAGCTCATTCGACCCATTTGCCGAGGCAAGAGAATCGGATGCCCCCGGAGCGAAGGAGTACGTGCACATACGGATCCAGCAGAGGAATGGGAAGAAGAGCCTGACCACAGTGCAAGGGCTGAAGAAAGAGTTCAGCTACGAGAAGATCCTTAAGGACCTCAAGAAAGAGTTCTGCTGCAACGGGAATGTCGTGCAGGACAAGGAACTCGGCAAGATAATCCAACTCCAAGGTGACCAACGCAAGAACGTCTCGCACTTTCTCCTTCAGGCTGGCCTTGTCAGAAAGGACCAGATCAAGATTCATGGTTTCTGA 435 0.4874 MRKPSYTFFIQFLFASQVSRILFPSKNKQSTYMVELEIQVASSFDPFAEARESDAPGAKEYVHIRIQQRNGKKSLTTVQGLKKEFSYEKILKDLKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSHFLLQAGLVRKDQIKIHGF 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2484 144 CDD eIF1_SUI1 60 143 IPR005874 GO:0003743
Aed4g2484 144 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 33 144 - -
Aed4g2484 144 PANTHER PROTEIN TRANSLATION FACTOR SUI1 HOMOLOG 33 144 - -
Aed4g2484 144 ProSiteProfiles Translation initiation factor SUI1 family profile. 62 132 IPR001950 GO:0003743|GO:0006413
Aed4g2484 144 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 37 144 IPR005874 GO:0003743
Aed4g2484 144 Pfam Translation initiation factor SUI1 59 132 IPR001950 GO:0003743|GO:0006413
Aed4g2484 144 SUPERFAMILY eIF1-like 28 144 IPR036877 GO:0003743|GO:0006413
Aed4g2484 144 Gene3D - 23 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2484 Aed-Chr4 26907640 26908074 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2484 33 144 Eukaryotic Initiation Factors Gene Family AT5G54940 83.036 8.36e-69 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2484 K03113 - gmx:100787664 228.794