Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2463 ATGTCGAATTTGCCCCAATCGCTGTCGATGGGCGCTGCCTTCGGCGGCGGTCTACCGTCGTCATCGAGTGGGGGCGCCGGAGGACAGGGCTCTGGCGCAGGCAAGGAACGAAAGATGGCATCGGCGGAGCAGCTCGTGCTCGAACTCAGCAACCCTGAGCTCCGTGAAAATGCGCTTCTCGAACTCTCCAAGAAGAGGGAGCTATTTCAAGATCTAGCTCCGTTGTTATGGAATTCTTTTGGTACTATTGCTGCACTTTTGCAGGAAATAGTTTCAATATACCCTGTTCTTTCACCACCAAATCTTACTCCTGCACAATCAAATCGAGTGTGCAATGCTCTTGCTCTGCTACAGTGTGTAGCCTCTCACCCTGATACAAGGATGCTATTCCTCAATGCTCATATTCCTCTATATCTGTATCCATTCCTTAATACAACAAGCAAGTCAAGACCTTTTGAGTACTTGAGGCTTACCAGCCTTGGTGTCATTGGTGCATTGGTGAAGGTTGATGATACAGAAGTTATAAGTTTCCTTCTTTCAACTGAGATAATTCCTTTGTGCTTGCGCACCATGGAAATGGGCAAGCGCTTTTTTGCGGTAGGGCGAGTTTTGGGGAATATGGTGGCAGCTCTCGCTGAGCAACCCTCATCTCGTCTATTGAAGCATATCATTCGATGCTATCTTCGCCTGTCAGATAATCCAAGGGCTTGTGATGCATTAAGAAGCTGTCTGCCAGACATGTTAAGAGATGCTACTTTCAGCACTTGCCTTCGTGAAGACCCCACAACTAGGAGGTGGCTACAACAATTGCTGCACAATGTTGGAGTGAATCGGGTTCCTGCACTACAAGCTGGAGGAGGTTTCGATCATATGATTGTGACCTGA 885 0.4802 MSNLPQSLSMGAAFGGGLPSSSSGGAGGQGSGAGKERKMASAEQLVLELSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGKRFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFSTCLREDPTTRRWLQQLLHNVGVNRVPALQAGGGFDHMIVT 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2463 294 SUPERFAMILY ARM repeat 50 249 IPR016024 -
Aed4g2463 294 PANTHER BNAA05G20110D PROTEIN 195 292 - -
Aed4g2463 294 PANTHER UNCHARACTERIZED 195 292 - -
Aed4g2463 294 PANTHER BNAA05G20110D PROTEIN 1 195 - -
Aed4g2463 294 PANTHER UNCHARACTERIZED 1 195 - -
Aed4g2463 294 MobiDBLite consensus disorder prediction 18 37 - -
Aed4g2463 294 Gene3D - 34 195 IPR011989 -
Aed4g2463 294 Gene3D - 196 278 IPR011989 -
Aed4g2463 294 Pfam Cell differentiation family, Rcd1-like 45 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2463 Aed-Chr4 26770930 26780398 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Aed4g2463 Rcd1 2.1e-74 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2463 K12606 - gmx:100784529 519.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2463 4 26770930 26780398 Aed3g2523 3 27576439 27580152 PCT