Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2459 ATGGAAGCTACCTTCAATGACAACTCTAATAATATTGCAGAAGTTACACATTCTTCTCCAATGATGTCGTTTAATGGGAAACGACTAGTCCTGGATGAGATGGATTTCTTCCCAGAGAACAAGAAAAAGAAGAAAAGTTCAGTTGATGATGATCATGATCAAATGGTGCACCAAATGGAGCTTCATGATCATGTGGATACTAATTTAGATCTCCTTACAAAGAGTTCTCCTATCAATAGATCAACTATGGGAGAAGGATCATCGGATGCAAGGGATAATAAGAGAAAGAAGCTTGTAGGTATGCAAGCCGAATTGCACCACATGAATGCTGAGAATCAACGGTTGAAAGAGTTAGTTGATCAGATGAACAATAAGTACAATGCTCTACACAAGCAACTTAAGAAACTGAAAGAGAAACAACATAAGAATGAGATTAACAAAGCCATAGAGGAGAAGCCTGAGAAAGATTATAGTCCAATTAGTCCAAGGCCATTTTTGGATTTTGGAGTTGCTATAAAACAAGAGAGTTCGCATCAGTATACAAAGGAAATACTGGGAGAAAGGAAGACTAAAAATATTTGCAGTACTAGTAGAGATCAACAATATGAGAGTAGTACTCCAGGTGAAAAGGCTAATAATATTACTGGTTGGCTCTCAAACGAAGTCACAAGAAGATTGAGTTCTTTCAGGGATGTTGATCAAGCGTCAGAAACCATGTCAATGATCAAGAAAGCTCGTGTATCAGTTCGAGCACGATCAGAGTCTTCCATGATTTCAGATGGATGCCAATGGAGAAAGTATGGGCAGAAGATGGCAAAAGGGAATCCATGTCCAAGATCCTATTATCGTTGCTCAATGGGGATTGCTTGTCCAGTTAGGAAGCAAGTACAAAGGAGTGCTGAGGATGAAAGTGTGTTGATCACAACATATGAAGGGCAACACAATCATGTACTCCCTCCAACTGCAAAGGCAATGGCATCCACCACATCATCAGCTGCAACAATGCTTCTTTCAGGATCAATGCCAAGTTCAGATGGCCTTATGCACCCAAACATGTTGGAATGCTCACGCAACATAGCAACCCTCTCAGCTTCAGCTCCATTTCCAACTATCACTTTGGATCTCACTAATAATAATTCCTTACAAGGGCCACTACAGCATAACCAACATGGCCTCCTTTCCCAACTTTTGGCTCAGAAGTTTATGCAATCAGCTCCAAATATTTTTGATAATGTGTCTCAGGGAACTGCAGAAACTGCTTCATTTGTAAATGCAGCAACAGCTGCTATCACTGCAGACCCCAAATTCAGTGCAGCTCTTATGGCTGCTGTAACATCTATTATTGGAAGTTCTTCACATCCAAACATTAATGGTACAAGTAGTGGAGATCCAGCATTGCGATAA 1404 0.4031 MEATFNDNSNNIAEVTHSSPMMSFNGKRLVLDEMDFFPENKKKKKSSVDDDHDQMVHQMELHDHVDTNLDLLTKSSPINRSTMGEGSSDARDNKRKKLVGMQAELHHMNAENQRLKELVDQMNNKYNALHKQLKKLKEKQHKNEINKAIEEKPEKDYSPISPRPFLDFGVAIKQESSHQYTKEILGERKTKNICSTSRDQQYESSTPGEKANNITGWLSNEVTRRLSSFRDVDQASETMSMIKKARVSVRARSESSMISDGCQWRKYGQKMAKGNPCPRSYYRCSMGIACPVRKQVQRSAEDESVLITTYEGQHNHVLPPTAKAMASTTSSAATMLLSGSMPSSDGLMHPNMLECSRNIATLSASAPFPTITLDLTNNNSLQGPLQHNQHGLLSQLLAQKFMQSAPNIFDNVSQGTAETASFVNAATAAITADPKFSAALMAAVTSIIGSSSHPNINGTSSGDPALR 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2459 467 PANTHER WRKY TRANSCRIPTION FACTOR 6-LIKE 16 455 - -
Aed4g2459 467 Coils Coil 98 139 - -
Aed4g2459 467 ProSiteProfiles WRKY domain profile. 253 319 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed4g2459 467 Pfam WRKY DNA -binding domain 260 316 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed4g2459 467 SMART WRKY_cls 258 318 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed4g2459 467 SUPERFAMILY WRKY DNA-binding domain 251 319 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed4g2459 467 Gene3D WRKY domain 243 320 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed4g2459 467 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 16 455 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2459 Aed-Chr4 26739218 26741639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2459 28 458 WRKY Transcription Factor Family AT1G62300 42.292 2.36e-90 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed4g2459 WRKY 4.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2459 - - gmx:100804246 497.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2459 4 26739218 26741639 Aed3g2528 3 27615587 27617559 PCT