Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2411 ATGGCAAAAATGGAATTCAGACTTGTCATATGGGACCAAAGCTTCCAACAACCTTTATCAGGTTTCTTTGCTAAGCCTGTGCAAAATTTGGAGTCATATTGCTTACCATCAAATGAGAACATAGACAATTACTCTTCGTCTGATAACAGCAGCCAAACAACTTACCCTTCAGTCCAAACTTTGGAACAATATTGCACCCTTGAATCTGCTTCCACGAGCAACAGTTTCCCTAGCCAAAACTCTCCACCTGCTCTCAGTTTCTCATCTAACAACAATAGTCCATTGTCAAAGCTAGAGTCAAACTCATATGTGTTAAGGCCACAACATTCTCTTGAATTTGCCAGTGGCTCACCCGAGGATGATTCTTACTTGACGCACGACCTCAACGACCTGACACATAAGATAAGAGAGATTGAAACTGCTATCATGGGATCTAATTCAGATTTGCTAGATATCTATGGTGCAATAATTCCAGAAGAGCCTGATTCATTTTTGTTAGAGGCAGAGAAGTGGAAGAAAATGATGGAGATGTCATCTAGAGGGGATTTGAAAGAGATGCTTTGCACTTGTGCAAAAGCAATGGCAGTGAATGATATGGAGACAACAGACTGGCTGATGTCCGAGTTGCGTAAGATGGTGTCCATTTCAGGCAATCCGATTCAGCGATTGGGAGCATACATATTGGAGTCTCTTGTTGCAAGGATGGCCGCTTCCGGAAGCACAATCTACAAATCCTTGAAATGTAGTGAGCCTACTGGTAATGAACTACTTTCATACATGCATGTGCTCTATGAAATCTGTCCATACTTCAAGTTTGGATACATGTCAGCAAATGGAGCAATTGCTGAAGCTCTGAAGGAGGAAAGTGAAGTTCACATAATTGACTTTCAGATTGCTCAGGGATCACAGTGGGTGAGCCTGATACAGGCTCTTGCTCGCCGGCCTGGAGGCCCCCCAAAGATCAGAATATCGGGTGTCGATGACTCGTATTCGGCCTATGCCAGGGGAGGGGAGCTTGACATTGTTGGGAAAAGGCTATCAGCACTTGCACAGTCATGTCATGTACCCTTTGAGTTCAATGCTGTGAGAGTATCTGCTTCTGAGGTGCAACTTGAAGACCTTGAGCTTCGCCCTTATGAAGCTGTGGCGGTGAACTTTGCCATTTGTCTGCACCATGTGCCTGATGGAAGTGTGAACATTCACAATCATCGCGACCAGTTGTTGAGGTTGGTGAAGCAATTGTCTCCTAAGGTGGTGACTCTGGTTGAGCAGGAGCTTCAAACCAACAATGTGCCGTTCTTGCAGCGTTTCGTTGAGGCAATGAACTACTACTTGGCTGTTTTTGAATCAATTGATACTGTTCTTCCAAGGGAGCACAAAGAGAGGATCAATGTGGAGCAGCATTGTTTGGCTCGCGAAGTTGTCAACTTGATAGCATGTGAAGGAGAAGAAAGAGTTGAACGCCACGAGCTTCTGGATAAGTGGAGAATGCGTTTCACAAAGGCTGGATTTACACCTTATCCATTGAGCTCCATTATTAATTCTTCAATCAAGGATCTTTTACAGAGCTACCATGGACACTACACTCTAGAAGAGAGAGATGGTGCACTGTTTCTTGGTTGGATGAATCAAGATCTTATTGCATCTTGTGCTTGGAGATGA 1662 0.441 MAKMEFRLVIWDQSFQQPLSGFFAKPVQNLESYCLPSNENIDNYSSSDNSSQTTYPSVQTLEQYCTLESASTSNSFPSQNSPPALSFSSNNNSPLSKLESNSYVLRPQHSLEFASGSPEDDSYLTHDLNDLTHKIREIETAIMGSNSDLLDIYGAIIPEEPDSFLLEAEKWKKMMEMSSRGDLKEMLCTCAKAMAVNDMETTDWLMSELRKMVSISGNPIQRLGAYILESLVARMAASGSTIYKSLKCSEPTGNELLSYMHVLYEICPYFKFGYMSANGAIAEALKEESEVHIIDFQIAQGSQWVSLIQALARRPGGPPKIRISGVDDSYSAYARGGELDIVGKRLSALAQSCHVPFEFNAVRVSASEVQLEDLELRPYEAVAVNFAICLHHVPDGSVNIHNHRDQLLRLVKQLSPKVVTLVEQELQTNNVPFLQRFVEAMNYYLAVFESIDTVLPREHKERINVEQHCLAREVVNLIACEGEERVERHELLDKWRMRFTKAGFTPYPLSSIINSSIKDLLQSYHGHYTLEERDGALFLGWMNQDLIASCAWR 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2411 553 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 23 552 IPR005202 -
Aed4g2411 553 Pfam GRAS domain family 184 553 IPR005202 -
Aed4g2411 553 ProSiteProfiles GRAS family profile. 174 553 IPR005202 -
Aed4g2411 553 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 23 552 - -
Aed4g2411 553 MobiDBLite consensus disorder prediction 72 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2411 Aed-Chr4 26351337 26354522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2411 57 553 GRAS Transcription Factor Family AT1G50600 58.882 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aed4g2411 GRAS 2.1e-130 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2411 - - gmx:100785400 924.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2411 4 26351337 26354522 Aed4g2411 4 26351337 26354522 ECH