Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2408 ATGATGCACCAATATGGGATTGATTTTCTCCTACAACCCATTTTCACACGAGGGGTGTCTGCTTCACTCCACCTAGTCTTTTTACTTGTGCTTGTTGTGAATTGGGTATGGAAGAAAGTTCAAGTGGACCATAGTGAAAGGAGTGAAACAAAGGAAATCCATAATTCTGGTTTCTTGTCCCACAAACTCAGTCTGGTTTGTAGCTTATTCATTTGTTTCTTCAACCTTGTGTTGTGCTTACTAAGTTACTTTTACTTGTATAATAACCATGATGGTTCAGAGGAGCTTGTCACACTTTCTGATTTGGCTCTCAAAACAGTTGTTTGGGGTGCTGTTTGTGCTTATTTACATTATTCTACAAACTCAAAGGCTCAGGATGCGAGTTTCTCAAGTTTGTTGAGAATTTGGTGGTCGGTCTATGCCTTTGTTTCTTGTTGTTGCCTTGTTATTGACTTTGTAGTCTATGGAAAGCATGTTTTCTTGCCAGTTATGTACCTTGTTTCTGATATAGGTTCCTCTATTACGGGTTTATTTCTATGTTATGTTGGATGTTCTGTTAACAATATGCCTAAGCTTGCCCCTCTTGAAGAGGCCCTTTTGAATGGCGACTCTAGTGTCAGCAACAACAATTCTGATTCCAGCAAAACTAGAGGAAATGAAAATTTATCCGGGTATTCAAATGCTGGATTTTTCAGCATTCTCACTTTCTCATGGATAAGTCCATTAATAACTCTGGGAAATGAGAAGACTTTAGACCATGAGGACCTCCCACTTCTTGGTGCTGATGACAGTGCCTATGGGGTTTTTCCAACTTTTAAAAACAAACTTGAGTCAGAGTGTGGTAGTGTTAGGAATGTGACAACTCTTAAGCTCCTAAAGGTATTATTTATGTCAGCATGGCAAGGGATCCTTTTATCAGGTTTATTTGCATTTATAAACACATGTGCTTCTTATGTTGGACCCTCTCTTATTGACATCTTTGTTCAATACCTCAATGGGGATCACAAGTTTAAAAATGAAGGCTATGTTTTGGCTTTGGCATTTGTTGCTGCAAAGCTTGTGGAGTGTCTTTCAGACAGGCACTCGATGTTTAGGTTCCAGCTGGTTGGGATAAGGATGCAATCAAAAATGGTGGCAATGATCTATGCTAAAGGATTGACTCTTTCATGCCAATCAAAGGAGGGTCGCAGCACTGGGGAAATCATTAACTTAATGACTGTTGATGCTGAAAGGATTGGTGGATTTTGTTGGCACATGCATGAACCATGGATGTGTGTTTTGCAAGTTACTTTGGCTTTGTTAATTCTATATAGAAGTGTAGGGGTTGCTTCAATAGCTGCTCTTGCTGCAACTGTACTTGTGATGTTGCTAAACCTTCCTGTGTCATCATTGCAAGAAAAATTCCAAGGCAAGGTAATGGAGTTCAAAGATAAGAGAATGAAGGCTACGTCTGAGGTTTTGATGAGTATGAGGATTCTAAAACTGCAAGCATGGGAGATGAAGTTCTTATCAAAGATTATTCAGCTTAGGAAGACTGAGGAGATATGGCTAAAGAAATTTCTAGCTGGCACAGCAATTATTAGACTTCTCTTCCATAATGCCCCAACTTTTATTGCTGTGGTTACATTTGGTGCCTGTGTTCTTCTAGGCATCCCACTTGAATCAGGAAAGGTATTATCTGCGCTTGCAACATTCAGAATTCTTCAAATGCCCATCTACGGTCTTCCTGACACGATTTCAAGCATTGCACAAACTAAGGTTTCCCTTGATAGGATTACATCATTTCTTCGTCAAGATGAGTTGCAGACTGATGTAGTAGAGAAGCTTCCATGGGGTAGTTCTGATAAGGCAATTGAATTAGCAGATGGAAATTTTTCTTGGGATTTATCTTCCCCTACTATAACATTGAAAAACATAAATCTCACAGTTTTTCATGGTATGAGGGTTGCTGTATGTGGAACTGTTGGATCAGGCAAGTCTAGTTTACTTTCTTGTATACTAGGGGAAGTACCAAAGATATCTGGGACACTGAAGATATGTGGAACAAAGGCTTATGTTTCTCAATCACCATGGATACAAGGTGGCAAGATAGAAGAAAACATATTATTTGGTAAAGAGATGGACAGGGAAAAATATGAAAAGGTGCTAGAAGCATGTTCCTTGACAAAAGACCTTGAGGTTCTACCATTTGGTGACAAGACCATTATTGGAGAGAAAGGAATCAATTTGAGTGGTGGACAGAAGCAAAGAGTACAAATAGCTCGTGCTCTATACCAAGATGCTGATATATATCTGTTTGATGATCCATTCAGTGCCGTGGATGCTCATACAGGATCCCATCTCTTTAAGGAGTGCTTGCTTGGCCTTTTAAAATCAAAAACTGTGATATACATAACTCATCAAGTAGAATTCTTACCTGATGCTGATCTAATATTGGTCATGAGAGATGGAAGGATAACTCAATCAGGAAAATACAATGACATTATCAGGTCAGGCACTGATTTTTTGGAACTTGTAGATGCACACAGAGCAGCTTTGTCTTCAATTAAGTCCTTAGAGAGAAGACCAACATCATTTAAAACATCAAGTATCACCAAGGAGGATTCAAACTCATTAAGTGATTTTGAACATGAACAAACTGTGGAAAACGTATATGATCAAAATGATAAGTCAGATGACACAGTTGAGCCCAAAGGACAACTTGTTCAAGAAGAAGAACGAGAAAAGGGTAGAGTTGGGATTAAATTATACTGGAAATACATCACAACAGCTTATGGAGGAGCTCTTGTACCCTTCATATTATTTTCACAGACACTCACCGTAGGTTTTCAGATTGCAAGCAATTATTGGATGACTGTGGCAACACCTGTTTCAGAAACTGCAGAACCTGATATTGGAAGCTTAACACTTATGGTTGTCTATGTAGCTTTGGCAATTGGAAGTTCCATTTTCACCTTTGCCAGAGCATTTCTTGCTGTGATAGCTGGATACAAGACAGCCACTGTGCTTTTCAATAAAATGCATTTGTGCATTTTTCAAGCACCAATATCATTTTTTGATGCCACCCCAAGTGGTCGAATCCTTAATAGAGCTTCAACAGACCAAAGTGCACTAGATATGTACATTTCAAATACAATATGGGCAATTACCCTCAATGTGTTCCAACTCTTGGGAAATATTACCGTGATGTCTCAAGCTGTCTGGCAGGTGTTTATAATATTGATTCCTGTCATGGCAGCATGCATATGGTACCAGCGATACTATTCAGCGTCAGCAAGGGAATTGGCACGATTAATTGGTACATGCCAAGCTCCAGTTATACAACATTTTTCTGAAACAATTTCTGGATCAACAACCATAAGAAGTTTTGAGCAAGAATCAAGATTTAATGACATAAATATGAAATTGATAGACAGATATTCGCAACCCAAATTATACAGTGCTACTGCAATGGAATGGCTGAATATCAGATTGGATATTTTATCAACTCTCACATTTGCCTTCTGTTTGGTTTTCTTGATATCATTTCCGAATTCAATGACTGCTCCTGGCATTGCAGGATTGGCTGTGACATATGGACTTAATCTAAACGCACTACAAGCTAAGATGATCTGGTTTATTTGCGATTTGGAGAACAAAATTATATCTGTTGAAAGAATACTCCAGTACACATCACTTCCAAGTGAACCTCCTCTTGTGATAAAAGACAATGAACCGGATTATTCTTGGCCATCATCTGGAGAGGTTCATATCCGGGATTTACAGGTTCGATATGCTCCTCACTTGCCTATAGTTTTGCGAGGTCTTACTTGCACTTTTACTGCTGGAGCAAAAACTGGCATTGTGGGAAGAACAGGAAGTGGAAAAACAACTTTAGTGCAAACACTTTTCCGACTTATTGAACCTGTTTCTGGAAAAATATTGATAGATAGCATTAATATCTCTATGATTGGACTTCACGATTTGAGGTCCAGACTAAGCATTATTCCTCAAGATCCAACAATGTTTGAAGGGACTGTAAGAACCAACCTGGACCCACTTGAAGAGTACACAGATCAACAGATTTGGGAGGCTCTAGATATGTGCCAACTTGGAGATGAAGTAAGGAAAAAAGAGGGGAATCTTGACTCCATAGTTACTGAGAATGGAGAAAATTGGAGTATGGGTCAAAGGCAATTGGTCTGCCTTGGCCGTGTTCTACTAAAGAAAAGCAAGATCTTGGTGCTTGATGAAGCTACTGCATCAGTTGATACAGCCACAGATAATATTATTCAGCAAACTGTTAAGCAGTATTTTTCAGAATGCACAGTCATTACCATTGCTCATAGGATAACTTCAATCATTGATAGTGACATGGTTCTGTTTTTAAATCAAGGGTTGATTGAGGAATATGACTCACCGAAGAAACTGCTTAAGAATAAATATTCATCTCTAGCTCAATTAGTTGCAGAATACACAAGGAGGTCAAATTCTGGTTTTGGAAATTAA 4488 0.3879 MMHQYGIDFLLQPIFTRGVSASLHLVFLLVLVVNWVWKKVQVDHSERSETKEIHNSGFLSHKLSLVCSLFICFFNLVLCLLSYFYLYNNHDGSEELVTLSDLALKTVVWGAVCAYLHYSTNSKAQDASFSSLLRIWWSVYAFVSCCCLVIDFVVYGKHVFLPVMYLVSDIGSSITGLFLCYVGCSVNNMPKLAPLEEALLNGDSSVSNNNSDSSKTRGNENLSGYSNAGFFSILTFSWISPLITLGNEKTLDHEDLPLLGADDSAYGVFPTFKNKLESECGSVRNVTTLKLLKVLFMSAWQGILLSGLFAFINTCASYVGPSLIDIFVQYLNGDHKFKNEGYVLALAFVAAKLVECLSDRHSMFRFQLVGIRMQSKMVAMIYAKGLTLSCQSKEGRSTGEIINLMTVDAERIGGFCWHMHEPWMCVLQVTLALLILYRSVGVASIAALAATVLVMLLNLPVSSLQEKFQGKVMEFKDKRMKATSEVLMSMRILKLQAWEMKFLSKIIQLRKTEEIWLKKFLAGTAIIRLLFHNAPTFIAVVTFGACVLLGIPLESGKVLSALATFRILQMPIYGLPDTISSIAQTKVSLDRITSFLRQDELQTDVVEKLPWGSSDKAIELADGNFSWDLSSPTITLKNINLTVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKICGTKAYVSQSPWIQGGKIEENILFGKEMDREKYEKVLEACSLTKDLEVLPFGDKTIIGEKGINLSGGQKQRVQIARALYQDADIYLFDDPFSAVDAHTGSHLFKECLLGLLKSKTVIYITHQVEFLPDADLILVMRDGRITQSGKYNDIIRSGTDFLELVDAHRAALSSIKSLERRPTSFKTSSITKEDSNSLSDFEHEQTVENVYDQNDKSDDTVEPKGQLVQEEEREKGRVGIKLYWKYITTAYGGALVPFILFSQTLTVGFQIASNYWMTVATPVSETAEPDIGSLTLMVVYVALAIGSSIFTFARAFLAVIAGYKTATVLFNKMHLCIFQAPISFFDATPSGRILNRASTDQSALDMYISNTIWAITLNVFQLLGNITVMSQAVWQVFIILIPVMAACIWYQRYYSASARELARLIGTCQAPVIQHFSETISGSTTIRSFEQESRFNDINMKLIDRYSQPKLYSATAMEWLNIRLDILSTLTFAFCLVFLISFPNSMTAPGIAGLAVTYGLNLNALQAKMIWFICDLENKIISVERILQYTSLPSEPPLVIKDNEPDYSWPSSGEVHIRDLQVRYAPHLPIVLRGLTCTFTAGAKTGIVGRTGSGKTTLVQTLFRLIEPVSGKILIDSINISMIGLHDLRSRLSIIPQDPTMFEGTVRTNLDPLEEYTDQQIWEALDMCQLGDEVRKKEGNLDSIVTENGENWSMGQRQLVCLGRVLLKKSKILVLDEATASVDTATDNIIQQTVKQYFSECTVITIAHRITSIIDSDMVLFLNQGLIEEYDSPKKLLKNKYSSLAQLVAEYTRRSNSGFGN 1495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2408 1495 CDD ABCC_MRP_domain1 618 818 - -
Aed4g2408 1495 CDD ABC_6TM_ABCC_D1 305 592 IPR044746 GO:0140359
Aed4g2408 1495 SUPERFAMILY ABC transporter transmembrane region 930 1231 IPR036640 GO:0005524|GO:0016021
Aed4g2408 1495 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 193 1495 - -
Aed4g2408 1495 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1239 1474 IPR027417 -
Aed4g2408 1495 Pfam ABC transporter 1267 1414 IPR003439 GO:0005524
Aed4g2408 1495 Gene3D ABC transporter type 1, transmembrane domain 894 1230 IPR036640 GO:0005524|GO:0016021
Aed4g2408 1495 Gene3D ABC transporter type 1, transmembrane domain 273 600 IPR036640 GO:0005524|GO:0016021
Aed4g2408 1495 CDD ABC_6TM_ABCC_D2 930 1224 IPR044726 GO:0140359
Aed4g2408 1495 MobiDBLite consensus disorder prediction 883 904 - -
Aed4g2408 1495 Pfam ABC transporter transmembrane region 932 1174 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed4g2408 1495 Pfam ABC transporter transmembrane region 304 571 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed4g2408 1495 ProSitePatterns ABC transporters family signature. 743 757 IPR017871 GO:0005524
Aed4g2408 1495 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 304 584 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed4g2408 1495 SUPERFAMILY ABC transporter transmembrane region 297 597 IPR036640 GO:0005524|GO:0016021
Aed4g2408 1495 Gene3D - 1232 1485 IPR027417 -
Aed4g2408 1495 CDD ABCC_MRP_domain2 1247 1467 - -
Aed4g2408 1495 Pfam ABC transporter 636 770 IPR003439 GO:0005524
Aed4g2408 1495 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 193 1495 - -
Aed4g2408 1495 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1249 1483 IPR003439 GO:0005524
Aed4g2408 1495 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 618 841 IPR003439 GO:0005524
Aed4g2408 1495 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 932 1212 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed4g2408 1495 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 614 840 IPR027417 -
Aed4g2408 1495 SMART AAA_5 1275 1460 IPR003593 -
Aed4g2408 1495 SMART AAA_5 645 818 IPR003593 -
Aed4g2408 1495 Gene3D - 612 846 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2408 Aed-Chr4 26319436 26326255 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2408 589 869 Calmodulin-binding Proteins AT2G36910 30.333 5.99e-27 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2408 - K05666 gmx:106794105 2525.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2408 4 26319436 26326255 Aed4g2408 4 26319436 26326255 ECH