Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2406 ATGTTGTCGTTTGTCTTATCACTCCACTCTCTTAGACACTTTGACAGTACTTTTCTGACATTTTTGGTGAAGCCGGTTTTCATGCATGGCTTATCTGGTGTCCTTCATCTACTGTTGTTAGTGGTGCTTTTAGTATCACTGTTGTGGAGGAAAGTCACAGTTGGAGCCAGAGAAAGTTGCAAAGAGAGCATTAATAATAGTACCTTGTTAGCAAGGATTCCTCCTCTTTGTTCACTTGTTGTTTCTGTTTTAAACCTTCTACTCTTTTTGTTCGATTACTTTTGTTGGTATAACAATGGTTGGTCAGAAGAAAAGCTTCTGACCCTTTTGGATTTGGTGCTCAAAACGGTTGCTTGGGGGGTTGGTGGTGTTTTCTTGCATAGGGAACTCTTCATTTCAAGGGAAAGAAGATTGCCATTCTTCTTCAGAGCTTGGTGCGTCCTTTACCTCTTTGTTTCCGGTTATTGCTTTATAGTGGACATTGTTCTCTATGAAAAGCATGCTGCTTTGCCTATTCAGTGCTTTGTTTCTGATGTTTTCTCTGTTTGTGTGGGTTTATTCTTCTGTTACTTGGGGTTCTTTTTAAAAAATGAGGGTAAAGTGGGAGATAGTAGTACTCTTCAAAAATCTCTTCTGAATGGAGAATCAAAAGAAAGTGATGTGTTTGGGACAGAAGAGATCAAGGGGGGTGATACTGTTACCCCTTACTCTAATGCTGGAATTTTTGGCCTTCTTACCTTCTCTTGGGTTGGTCCTCTGATTGCTCTTGGAAAGAAGAAGACTTTGGACCTTGAGGATGTCCCCCAACTTGACAAAAGAGACAGTTTAGTTGGGGCTTTTCCAACTTTTAGGGACAAGCTTGAGGCATGTTGTGGAGAAAGCAACACAGTGACCACACTTGAGTTAGTGAAGTCATTAGTATTCTCAACCTGGACAGAGATTATTTCCACAGCTATCCTTGCATTGGTAAACACATTGGCGACTTTTGTTGGTCCTTATCTCATTGATGGTTTTGTCCAATACCTTAATGGAAAACGGCGATTTGAAAATGAGGGCCTTGTTTTGGTTTCTGCATTTTGTGTGGCAAAGCTTGTAGAGTGCCTCACAAAGAGGCATTGGTTCTTTAGGTTGCAGCAGGTTGGATTACGAATGCGAGCACTGCTCGTGACAATCATATATAATAAAGCTTTGAACCTTTCATGTCCATCCAAGCAAGGCCACACCACTGGGGAAATAATCAACTTCATGACTGTTGATGCAGAAAGAGTTGGTGAGTTCAGTTGGCACCTACATGATCTGTGGTTAGTAGTCCTACAGGTTTTAGTAGGCTTGTTGATTTTGTACGAAAATCTTGGGCTTGCTTCAATTGCTGGCTTTGTTGCAATTCTCATTGTAATGTGGGCAAACATTCCCTTGGGTTCAACCCAGGAGAAGTTTCACAACAAGTTGATGGAGTCAAAAGATGAAAGAATGAAAGCAACATCTGAGATTTTAAGGAACATGAGGATTCTCAAACTGCAAGGATGGAAAATGAAGTTTTTGTCTAAGATAACCGAACTCAGAAATGTTGAGCAAGGCTGGTTAAAAAAAGTTATATACACTTTAGCCATGATCATATTTTTATTTTGGTGTGCCCCAGCATTTGTGTCTGTGGTTACTTTTGGTACTTGTATGCTTATAGGGATCCCTCTTGAATCAGGGAAGATCTTGTCTACACTTGCCACATTCCAGATTCTCCAAGAACCCATTTATAATCTTCCAGAGGCAGTTTCAATGATGGCACAGACTAAAGTTTCTCTTGATAGAATTGCATCTTTCCTTTGTCTCGATGAGATGCAATCTGATGTTGTGAAGAAGCTTTCACCGGGTAGTTCTAATATAGCAATTGAAGTGGTTGATGGGAATTTCTCTTGGGATTTATTTTCCCCCAAAACAACATTGCAAAACATAAATCTCAGAGTTTTTCATGGTATGAGGGTTGCTGTCTGTGGTACTGTTGGATCAGGCAAGTCTACTTTACTTTCTTGTATATTGGGAGAAGTACCAAAGAAATCAGGGATCCTGAAGGTGTGTGGAACAAAGGGCTATGTAGCTCAGTCACCATGGATACAAAGTAGCACCATAGAGGACAATATATTGTTTGGCAAGGATATGGAAAGGGAAAGATATGAGAAGGTCCTTGAAGCTTGTTGCCTAAAGAAGGATCTAGATATTTTTTCATTTGGAGATCAGACTATTATAGGAGAGAGGGGGATAAATTTGAGTGGTGGACAGAAACAAAGAATACAAATTGCTCGTGCTCTATACCAAGATGCTGACATATATCTATTTGATGATATGTTTAGTGCTGTGGATGCTAATACAGGATCTCATCTTTTTAAGGAATGCTTACTAGGCCTTTTAAGTTCAAAGACAGTGGTATATGTCACTCATCAAGTAGAGTTCTTACCTGCTGCTGACCTTATCTTGGTCATGAAAGATGGGAATATAACTCAATGTGGAAAATATTATGATCTGCTCAACTCAAGCACTGATTTTATGGAACTGGTTGGTGCTCACAAAGAAGCTTTGTCTGCACTTGATTCAATAGATGGAGAGACAGTATCTGATAAAATAAGCGTCTCTCTTTCTCATGGTGTTGAAGAAAAAGAAGTAAAGAAAGATGTGCAAAATGGTGGAAAAGATGACAAATCTCATCCAGAAGGTCAACTTGTCCAAGAAGAAGAAAGAGAGAAAGGTAAAGTTGGGTTTTCAGTTTGTTGGAAATATATAACAGCAGCATATGGAGGAGCACTTATACCACTCATATTGTTGGCTGAAATTTTGTTTCAACTTCTTCAAATTGGAAGCAACTATTGGATGGCTTTGGCAACTCCTATCTCAACTGATGTTGAGTCACCTGTTGGAGGAAGTAAGCTTATAGTTGTCTATGTAGCTTTGGCCATAGGAAGTTCCGTGTGTGTCCTTGCAAGAGCAACACTTATTGCCACAGCTGGTTATAAGACAGCTACTTTACTCTTCAACAACATGCATTTCTGTATTTTCCACGCTCCAATGTCTTTTTTTGATTCCACTCCAAGTGGGAGAATCCTTAATAGGGCTTCAACTGACCAAAGTGCAGTGGATATAGACATTCCTTTTCAAGCTGGATCTCTTGCTTCCTCTGTGGTTCATGTTCTTGGAATTATAGTGGTGATGTCTCAAGTTGCATGGCAGGTTTTCATTGTCTTTATTCCTATTACAGCAATCAGCATTTGGTATCAGCAATATTACTTACCATCAGCCAGGGAACTATCACGTTTAGTTGGGGTATGCAAAGCTCCTGTCATTCAACACTTTGCTGAAACAATATCAGGCTCATCAACCATCAGGAGCTTTGATCAGGTGTCTAGATTTCAGCAAACAAATATGAAACTAATGGATGGATATTCTCGCCCCAAGTTCAACAATGCTGGTGCTATGGAATGGTTGTGCTTCCGTTTAGATATGTTGTCTTCTATCACATTTGCCTTTTGCTTGATATTCTTGATATCTATTCCACATGGATTCATAGATTCAGGTGTTGCTGGTTTAGCTGTAATCTATGGCCTTAATCTGAACATTATACAATCATGGATGATATGGGAACTTTGCAGCTTGGAGACTAAAATTATATCAGTCGAAAGAATACTTCAGTATACTTCAATTCCTAGTGAGCCTCCTCTTGTTGTAGAGGAAAACCGGCCGCATGATTCTTGGCCATCATGTGGCAGGATCGATATTCACAACTTGCAGGTACGTTATGCTGCACATATGCCATTTGTGTTGCATGGCCTTTCATGCACATTTCATGGAGGACTGAAAACTGGAATTGTTGGGAGAACAGGAAGTGGAAAATCAACTCTAATACAAACACTTTTTCGAATCATTGATCCTACTGTTGGGAGAATTATGATTGATGGCATCAACATCTCATCCATTGGACTTTATGATTTGAGGTCTAGACTAAGCATCATTCCTCAGGATCCAACTATGTTTGAAGGCACTGTGAGAAGTAATCTGGACCCACTAGAAGAGTACACAGATGAACAAATTTGGGAGGCCCTTGATAAGTGTCAACTTGGAGATGAAAGTAAGGTCTTGGTGTTAGATGAAGCTACTGCATCTGTTGACACAGCTACAGATAATTTGATTCAGCAAACTCTAAGGCAACATTTCTCTGATTGCACAGTCATTACCATTGCACATGGAATAACTTCTGTAATTGATAGTGATATGGTTCTACTACTTAATCAAGGACTTATTGAGGAGTATGATTCTCCAACAAGGTTGCTAGAAGACAAGTTATCTTCGTTTGCTCAGCTTGTTGCAGAGTATACCACAAGGTCCAATTCCAGTTTTGACCAACCAAAATAA 4395 0.3973 MLSFVLSLHSLRHFDSTFLTFLVKPVFMHGLSGVLHLLLLVVLLVSLLWRKVTVGARESCKESINNSTLLARIPPLCSLVVSVLNLLLFLFDYFCWYNNGWSEEKLLTLLDLVLKTVAWGVGGVFLHRELFISRERRLPFFFRAWCVLYLFVSGYCFIVDIVLYEKHAALPIQCFVSDVFSVCVGLFFCYLGFFLKNEGKVGDSSTLQKSLLNGESKESDVFGTEEIKGGDTVTPYSNAGIFGLLTFSWVGPLIALGKKKTLDLEDVPQLDKRDSLVGAFPTFRDKLEACCGESNTVTTLELVKSLVFSTWTEIISTAILALVNTLATFVGPYLIDGFVQYLNGKRRFENEGLVLVSAFCVAKLVECLTKRHWFFRLQQVGLRMRALLVTIIYNKALNLSCPSKQGHTTGEIINFMTVDAERVGEFSWHLHDLWLVVLQVLVGLLILYENLGLASIAGFVAILIVMWANIPLGSTQEKFHNKLMESKDERMKATSEILRNMRILKLQGWKMKFLSKITELRNVEQGWLKKVIYTLAMIIFLFWCAPAFVSVVTFGTCMLIGIPLESGKILSTLATFQILQEPIYNLPEAVSMMAQTKVSLDRIASFLCLDEMQSDVVKKLSPGSSNIAIEVVDGNFSWDLFSPKTTLQNINLRVFHGMRVAVCGTVGSGKSTLLSCILGEVPKKSGILKVCGTKGYVAQSPWIQSSTIEDNILFGKDMERERYEKVLEACCLKKDLDIFSFGDQTIIGERGINLSGGQKQRIQIARALYQDADIYLFDDMFSAVDANTGSHLFKECLLGLLSSKTVVYVTHQVEFLPAADLILVMKDGNITQCGKYYDLLNSSTDFMELVGAHKEALSALDSIDGETVSDKISVSLSHGVEEKEVKKDVQNGGKDDKSHPEGQLVQEEEREKGKVGFSVCWKYITAAYGGALIPLILLAEILFQLLQIGSNYWMALATPISTDVESPVGGSKLIVVYVALAIGSSVCVLARATLIATAGYKTATLLFNNMHFCIFHAPMSFFDSTPSGRILNRASTDQSAVDIDIPFQAGSLASSVVHVLGIIVVMSQVAWQVFIVFIPITAISIWYQQYYLPSARELSRLVGVCKAPVIQHFAETISGSSTIRSFDQVSRFQQTNMKLMDGYSRPKFNNAGAMEWLCFRLDMLSSITFAFCLIFLISIPHGFIDSGVAGLAVIYGLNLNIIQSWMIWELCSLETKIISVERILQYTSIPSEPPLVVEENRPHDSWPSCGRIDIHNLQVRYAAHMPFVLHGLSCTFHGGLKTGIVGRTGSGKSTLIQTLFRIIDPTVGRIMIDGINISSIGLYDLRSRLSIIPQDPTMFEGTVRSNLDPLEEYTDEQIWEALDKCQLGDESKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHGITSVIDSDMVLLLNQGLIEEYDSPTRLLEDKLSSFAQLVAEYTTRSNSSFDQPK 1464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2406 1464 Pfam ABC transporter 1269 1373 IPR003439 GO:0005524
Aed4g2406 1464 MobiDBLite consensus disorder prediction 882 909 - -
Aed4g2406 1464 CDD ABC_6TM_ABCC_D2 933 1227 IPR044726 GO:0140359
Aed4g2406 1464 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 88 1371 - -
Aed4g2406 1464 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 318 595 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed4g2406 1464 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 935 1215 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed4g2406 1464 CDD ABCC_MRP_domain1 629 828 - -
Aed4g2406 1464 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 628 851 IPR027417 -
Aed4g2406 1464 CDD ABC_6TM_ABCC_D1 317 603 IPR044746 GO:0140359
Aed4g2406 1464 Pfam ABC transporter transmembrane region 935 1176 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed4g2406 1464 Pfam ABC transporter transmembrane region 318 582 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed4g2406 1464 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 1371 1464 - -
Aed4g2406 1464 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 88 1371 - -
Aed4g2406 1464 SUPERFAMILY ABC transporter transmembrane region 932 1234 IPR036640 GO:0005524|GO:0016021
Aed4g2406 1464 Pfam ABC transporter 647 780 IPR003439 GO:0005524
Aed4g2406 1464 ProSitePatterns ABC transporters family signature. 754 768 IPR017871 GO:0005524
Aed4g2406 1464 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1243 1440 IPR027417 -
Aed4g2406 1464 Gene3D - 608 869 IPR027417 -
Aed4g2406 1464 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1254 1450 IPR003439 GO:0005524
Aed4g2406 1464 SUPERFAMILY ABC transporter transmembrane region 308 607 IPR036640 GO:0005524|GO:0016021
Aed4g2406 1464 Gene3D ABC transporter type 1, transmembrane domain 895 1233 IPR036640 GO:0005524|GO:0016021
Aed4g2406 1464 Gene3D ABC transporter type 1, transmembrane domain 292 607 IPR036640 GO:0005524|GO:0016021
Aed4g2406 1464 Gene3D - 1370 1461 IPR027417 -
Aed4g2406 1464 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 629 852 IPR003439 GO:0005524
Aed4g2406 1464 Gene3D - 1235 1369 IPR027417 -
Aed4g2406 1464 SMART AAA_5 656 829 IPR003593 -
Aed4g2406 1464 SMART AAA_5 1278 1427 IPR003593 -
Aed4g2406 1464 CDD ABCC_MRP_domain2 1250 1434 - -
Aed4g2406 1464 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1371 1464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2406 Aed-Chr4 26301447 26307318 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2406 629 875 Calmodulin-binding Proteins AT2G36910 29.213 9.34e-24 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2406 - K05666 gmx:100776443 2538.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2406 4 26301447 26307318 Aed4g2406 4 26301447 26307318 ECH