Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2402 ATGGACTTAGGTCTCCAAAACATTCCCTCACTTGCAATCTTACCCTTCTTCCTCTTCCGGTTCACAGTGTTTAGCATATTTTGGAGATCAAAAACCAAGCCTTCAAACTCCAAGTCCAAGTTACCACCAGGACCACCAAAACTTCCTCTTATTGGAAACTTGCATCAACTTGGTGCAATGCCACACCATGGCCTAACAAAACTATCACACCAATATGGCCCTCTCATGCACATTAAACTTGGTGCACTTTCCACCATAGTGGTGTCTTCACCTGAAATGGCCAAGGAAGTAATGAAGACACATGACATCATTTTTGCAAATAGGCCTCATCTTCTTGTGGCAGATGAGAAAGGATTGAGGTCCAAAGTTGAGGAGTTGCATCAAGAATTAGATAGGATCCTTGAGAAAATTGTGAGAGATCACAGGGACACAAGTTCGGAAACAAAGGAAACCAATGATAAAACAGGAGAGGATCTAGTTGATGTGCTACTCAAGCTTCAGAGGCAGAACAACCTTGAACATCCTCTATCTGATAGCGTTATCAAAGCAACCATTTTGGATATCTTCAGTGCTGGAAGTGGTACTTCAGCCAAAACCTTAGAGTGGGCAATGTCAGAACTTGTCAAAAACCCAAGGGTGATGAAGAAAGCACAAGCTGAGGTGAGATGGGTCTTTGGTGAAAAAGGGCATGTAGATGAAGCTAATCTGCATGAACTGAAGTACTTAAAGTCAGTAACCAAAGAAACACTGCGTCTACACATTCCTGTTCCATTTTTACTACCAAGGGAATGTAGTGAGAGATGTGAAATTAGTGGACATGAAATACCAGCCAAGAGCAAGGTTATTATCAACGCTTGGGCCATTGGAAGGGATCCAAACTATTGCAATGATGCTGAGAAGTTTTCTCCAGAAAGGTTCCTTGATAGCTCAGTTGATTACAAAGGTGCAGATTTTCAATTTATTCCATTTGGTGCTGGAAGGAGGATGTGTCCAGGAAGTACATTTGGCGTTGCTAATGTTGAACTTTTGCTTGCAAATTTGCTTTTCCACTTTGATTGGAAGATGCCTAATGGGAACAAGCCTGAAGAACTTGACATGACTGAATCATTTGGCTTGTCTGTTAAAAGAAAACACGATTTGTATTTGATTCCTAACATTGTGTAG 1164 0.4132 MDLGLQNIPSLAILPFFLFRFTVFSIFWRSKTKPSNSKSKLPPGPPKLPLIGNLHQLGAMPHHGLTKLSHQYGPLMHIKLGALSTIVVSSPEMAKEVMKTHDIIFANRPHLLVADEKGLRSKVEELHQELDRILEKIVRDHRDTSSETKETNDKTGEDLVDVLLKLQRQNNLEHPLSDSVIKATILDIFSAGSGTSAKTLEWAMSELVKNPRVMKKAQAEVRWVFGEKGHVDEANLHELKYLKSVTKETLRLHIPVPFLLPRECSERCEISGHEIPAKSKVIINAWAIGRDPNYCNDAEKFSPERFLDSSVDYKGADFQFIPFGAGRRMCPGSTFGVANVELLLANLLFHFDWKMPNGNKPEELDMTESFGLSVKRKHDLYLIPNIV 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2402 387 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 118 386 - -
Aed4g2402 387 Gene3D Cytochrome P450 119 382 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2402 387 Gene3D Cytochrome P450 27 118 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2402 387 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 9 115 - -
Aed4g2402 387 PRINTS E-class P450 group IV signature 239 255 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2402 387 PRINTS E-class P450 group IV signature 314 330 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2402 387 PRINTS E-class P450 group IV signature 182 208 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2402 387 PRINTS E-class P450 group IV signature 330 348 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2402 387 PRINTS E-class P450 group IV signature 289 307 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2402 387 PANTHER CYTOCHROME P450 71B11-RELATED 9 115 - -
Aed4g2402 387 SUPERFAMILY Cytochrome P450 37 383 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2402 387 PANTHER CYTOCHROME P450 71B11-RELATED 118 386 - -
Aed4g2402 387 PRINTS P450 superfamily signature 191 208 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2402 387 PRINTS P450 superfamily signature 244 255 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2402 387 PRINTS P450 superfamily signature 321 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2402 387 Coils Coil 116 136 - -
Aed4g2402 387 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 323 332 IPR017972 GO:0005506|GO:0016705
Aed4g2402 387 Pfam Cytochrome P450 120 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2402 387 Pfam Cytochrome P450 42 110 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2402 Aed-Chr4 26279736 26281898 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2402 10 384 Cytochrome P450 AT3G26180 41.223 8.39e-95 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2402 - K23806 gmx:100818000 488.804