Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2401 ATGAAGGTTCTACAATCTATAAGGGTAGCAAATTCACACAGTTTCATCAGTAGAACTGATAGCCTTGATCTAAGTTCTGTTTCCACCATGGATCATCAAACCCTCTACTTAACATCCATTTTATCCATTTTCATTTTTATATTTATGGCCCACAAAATAATGACAAAGAAATCTGCCTCAACTCCAAATCTACCACCAGGGCCGTGGAAACTACCCATCATAGGGAACATACACAACCTTGTTGGCTCACTTCCCCATCATAGACTAAGAGATTTATCAGAAAAATATGGACCCTTGATGCATCTTAAGCTTGGAGAGGTTTCTACCATTGTGGTTTCATCCCCAGAGTATGCTAAAGAGGTGTTCAATACCCATGATCTCATCTTTTCATCAAGGCCTCCAATACTAGCTTCAAAGATAATGTCTTATGATTCTAAGGGCATGACTTTTGCACCTTATGGGGATTATTGGAGACAGCTAAGGAAGATTTGTACTTCGGAGCTATTAAGCTCAAAACGTGTCCAGTCTTTCCAACCAATCAGAGGGGAAGAACTCACCAACTTCATCAAAAGGATTGCCTCAAAAGAAGGGTCACCAATAAATCTCACCAGAGAACTGCTTATAACAGTATCTACAATTGTTTCAAGGACAGCCCTTGGCAACAAGTGTAGGGACCATCAAAAGTTCATATTAGCTGTAAGGAAAGCCACAGAGGCTGCTGGAGGTTTTGACTTGGGAGATTTGTACCCTTCTGCCGAATGGCTCCAACACATCTCAGGGCTGAAGCCTAAGCTTGAGAAGTATCATCAGCAAGCTGATCAGATAATGCAAAGCATCATCAATGAACATAGAGAGGCTAAGCCAAGTGCCACACAAGGACAGGGTGAACAAGTGGAGGATGATCTTGTAGATGTGCTCATGAGGGAGGAGTTTGGCTTAAGTGACAATAGTGTCAAGGCTGTCATTTTGGATATGTTTGGAGGTGGAACTCAGACGTCATCCACTACCATAACATGGGCAATGGCAGAGATGATAAAAAATCCAAGAGTAATGAAGAAGGTACATGCTGAGGTAAGAGAGGTGTTTGGTAAAATAGGACACCTCAATGAAAGTGACATGGAGAATCTAAAATACTTGAAATCTGTTGTGAAAGAGACATTGAGATTGCACCCTCCTGGTCCCCTTTTGCTTCCAAGAGAGTGTGGACAAGCTTGTGAGATCAATGGTTATCACATACCAATCAAAAGCAAGGTGATAATCAATGCTTGGGCCATTGGAAGGGATCCAAATCATTGGAGTGAGGCTGAGAGGTTTTATCCTGAGAGGTTCATTGGAAGTTCTGTTGACTACAAAGGCAATAGTTTTGAGTACATTCCATTTGGTGCTGGAAGAAGAATATGCCCTGGCCTCACATTTGGCTTGACCAATGTTGAGTTTCCACTTGCATTGCTAATGTATCATTTTGATTGGAAACTTCCCAACGGAATGAAGAATAATGAAGAGTTGGACATGACTGAGGCTTTTGGAGTATCTGCTCGTAGAAAAGATGATTTGTGCCTCATTCCTATCACTTTCCATCCTTAG 1584 0.416 MKVLQSIRVANSHSFISRTDSLDLSSVSTMDHQTLYLTSILSIFIFIFMAHKIMTKKSASTPNLPPGPWKLPIIGNIHNLVGSLPHHRLRDLSEKYGPLMHLKLGEVSTIVVSSPEYAKEVFNTHDLIFSSRPPILASKIMSYDSKGMTFAPYGDYWRQLRKICTSELLSSKRVQSFQPIRGEELTNFIKRIASKEGSPINLTRELLITVSTIVSRTALGNKCRDHQKFILAVRKATEAAGGFDLGDLYPSAEWLQHISGLKPKLEKYHQQADQIMQSIINEHREAKPSATQGQGEQVEDDLVDVLMREEFGLSDNSVKAVILDMFGGGTQTSSTTITWAMAEMIKNPRVMKKVHAEVREVFGKIGHLNESDMENLKYLKSVVKETLRLHPPGPLLLPRECGQACEINGYHIPIKSKVIINAWAIGRDPNHWSEAERFYPERFIGSSVDYKGNSFEYIPFGAGRRICPGLTFGLTNVEFPLALLMYHFDWKLPNGMKNNEELDMTEAFGVSARRKDDLCLIPITFHP 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2401 527 Pfam Cytochrome P450 65 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2401 527 Gene3D Cytochrome P450 57 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2401 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Aed4g2401 527 PRINTS E-class P450 group I signature 380 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2401 527 PRINTS E-class P450 group I signature 421 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2401 527 PRINTS E-class P450 group I signature 117 138 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2401 527 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2401 527 PRINTS E-class P450 group I signature 93 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2401 527 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2401 527 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2401 527 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2401 527 SUPERFAMILY Cytochrome P450 65 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2401 527 PANTHER CYTOCHROME P450 71B11-RELATED 37 525 - -
Aed4g2401 527 PRINTS P450 superfamily signature 381 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2401 527 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2401 527 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2401 527 PANTHER CYTOCHROME P450 71D9 37 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2401 Aed-Chr4 26276218 26278569 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2401 43 525 Cytochrome P450 AT3G26300 42.169 5.32e-136 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2401 - K13267 gmx:100813216 908.286