Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2400 ATGAAAACCCATGACATTAACTTTGCCACAAGGCCTCATATCCTAGCTATGGAAAAAATATCTTACAATTCCACAAATATAGCTTTTGCTCCCTATGGCAATTATTGGAGGCAGCTAAGAAAAATTTGCACATTGGAGCTTTTAAGCCTAAAACGTGTCAACTCATACCAGCCAACTAGAGAAGATGAGATCTCCAATCTAGTCAAATGGATTGATTCACAGAACGGATCCCCCATCAACTTCACTCAAGCAGTACTTTCATCAATATTTACAATTGCTTCAAGGGCTACCTTTGGCAACAAATGCAAAGACCAAGAAAAATTTATATCAGTGATTAAAAGAATAACAAAAATTTCTGCAGGTTTGTCCATTGGAGATTTGTTTCCTTCCGCCACTTGGCTTCAACTTCTCACTAGCTTGAGCTCTAAGCTTGAGAGGTTGCATCAAGAAGCTGACCAGATAATGGAAAACATCATCAATGAACATAAAGAGGCAAAGTCAAAAGCCAGAGATGACCAAAGTGAAGCTGAAGATTTTGTGGATGTTCTCATACAATATGAGGATGGAAGCAAGCAGGATTTTTCTATAACTAGAAACAACATGAAGGCCATAATTCTGGACATTTTTGGTGTTGGAGGTGAGACATCAGCGACAACCATAGATTGGACAATGGCTGAAATGATGAAGAATCCAAGAGTAATGAAGAAAGCACAAGCTGAGGTGAGAGAGGTATTCAATATGAAAGGAAGGGTTGGTGAAAACTTCATCAATGAACTTCAATATTTGAAACTAGTTGTCAAAGAGACCTTGAGGTTACACCCGCCAACTCCTCTTTTGCTTCCAAGAGAATGTGATCAAACATGTGAGATAAATGGTTATGACATACCAGCCAAAAGCAAGGTCGTGGTCAATGCTTGGGCAATTGGAAGAGATCCAAACTATTGGACTGAAGCAGAGAGGTTTTATCCTGAGAGGTTCATTGATAGCACTGTTGATTACAAAGGGACTAATTTTGAGTACATTCCTTTTGGTGCTGGAAGAAGGATGTGCCCAGGCAGCATGTTTGCTTCGAGAATTATTGAACTAGCCCTTGCAATGTTGTTGTATCACTTTGATTGGAAGCTTCCCAATGGAATGATAAGTGAAGAGTTAGACATGAGTGATGAGTTTGGATAG 1176 0.3937 MKTHDINFATRPHILAMEKISYNSTNIAFAPYGNYWRQLRKICTLELLSLKRVNSYQPTREDEISNLVKWIDSQNGSPINFTQAVLSSIFTIASRATFGNKCKDQEKFISVIKRITKISAGLSIGDLFPSATWLQLLTSLSSKLERLHQEADQIMENIINEHKEAKSKARDDQSEAEDFVDVLIQYEDGSKQDFSITRNNMKAIILDIFGVGGETSATTIDWTMAEMMKNPRVMKKAQAEVREVFNMKGRVGENFINELQYLKLVVKETLRLHPPTPLLLPRECDQTCEINGYDIPAKSKVVVNAWAIGRDPNYWTEAERFYPERFIDSTVDYKGTNFEYIPFGAGRRMCPGSMFASRIIELALAMLLYHFDWKLPNGMISEELDMSDEFG 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2400 391 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 343 352 IPR017972 GO:0005506|GO:0016705
Aed4g2400 391 PRINTS E-class P450 group I signature 220 246 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2400 391 PRINTS E-class P450 group I signature 263 281 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2400 391 PRINTS E-class P450 group I signature 200 217 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2400 391 PRINTS E-class P450 group I signature 350 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2400 391 PRINTS E-class P450 group I signature 304 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2400 391 PRINTS E-class P450 group I signature 340 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2400 391 Coils Coil 137 175 - -
Aed4g2400 391 Pfam Cytochrome P450 4 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2400 391 PANTHER CYTOCHROME P450 71B11-RELATED 1 391 - -
Aed4g2400 391 SUPERFAMILY Cytochrome P450 2 380 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2400 391 PRINTS P450 superfamily signature 341 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2400 391 PRINTS P450 superfamily signature 211 228 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2400 391 PRINTS P450 superfamily signature 264 275 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2400 391 Gene3D Cytochrome P450 1 390 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2400 391 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 1 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2400 Aed-Chr4 26273653 26274928 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2400 1 389 Cytochrome P450 AT3G26210 43.358 7.03e-113 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2400 - - gmx:100778572 661.759