Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2398 ATTGAGAGACCTGGCCTTAAAATATGGATCCGTGATGCATCTTCAACTAGGAGAGGTTTCTACTATTGTCATTTCATCCCTGAGTGTGCTAAGGAAGTGATGAAAACCCATGATATTAACTTTGCCACAAGGCCTAAAGTCCTAGCTGTTGAAAAAATGTCTTACAATTCCACAAATATAGCTTTTGCTCCCTATGGCAATTATTGGAGGCAGCTAAGAAAAATTTGCACATTAGAGCTTTTAAGCCTAAAACGTGTCAACTCATATCAGCCAATTAGAGAAGATGAGCTCACCAATCTTGTCAAATTAATTGATTCACAGAAAGGATCTCCCATCAACCTCACTCAAACAGTGCTTACATCAATTTATACAATTACTTCAAGGTCTGCATTTGGCAACAAATGCAAAGACCAAGAAAAATTTATATCAGTGGTTAAAAAACAAACAAAATTTGCTGCAGGTTTAGGCATTGGAGATTTTTTTCCTTCGGCCACTTGGATTCAAAATCTCACTGGCTTGATGCCTAAGCTTGAGAGGTTGCATCAACAAGGTGATCAGATAATGGAAAACATCATCAATGACCATAAAGAGGCAAAATCAAAAGCCAGAGATGACCAAAGTGAAGCAGAAGATCTTGTGGATGTTCTCTTACAATATGAGGATGGCAGCAAGCAGGATTTTTCCATAACTAAAAACAACATTAAGGCCATAATTCTGGACATTTTTGGTGCTGGTGGTGAGACATCAGCAACAACCATAGATTGGGCAATGGCTGAAATGATGAAGAATCCACGAGTAATGAAGAAAGCACAAGCTGAGGTGAGAGAGGTATTCAATATGAAAGGAAGGGTTGATGAAAACTGCATCAATGAACTCAGCTATTTGAAACAAGTTGTGAGAGAGACCTTGAGATTACACCCTCCAGTTCCTCTTTTGCTTCCAAGAGAATGTGGTCAAACATGTGAGATAAATGGTTATCACATACCAGCCAAAAGCAAGGTCATAGTCAATGCTTGGGCAATTGGAAGAGATCCAAACTATTGGACTAAAGCAGAGAGGTTTTATCCTGAGAGGTTCATTGATAGCACTATTGATTACAAAGGGAGTGATTTTGAGTTCATTCCTTTTGGTGCTGGAAGAAGGATATGCCCAGGAATCACATTTGCTTCGAGAATTATTGAACTAGCCCTTGCAATGTTGTTGTATCACTTTGATTGGAAGCTTCCCAATGGAATGATGAGTGAAGAGTTGGACATGAGTGATGAGTTTGGAGTCACAGTTAGCAGAAAAGTTGATCTATTCTTGGTTCCTTTTCCTGTCACATGA 1326 0.3906 IERPGLKIWIRDASSTRRGFYYCHFIPECAKEVMKTHDINFATRPKVLAVEKMSYNSTNIAFAPYGNYWRQLRKICTLELLSLKRVNSYQPIREDELTNLVKLIDSQKGSPINLTQTVLTSIYTITSRSAFGNKCKDQEKFISVVKKQTKFAAGLGIGDFFPSATWIQNLTGLMPKLERLHQQGDQIMENIINDHKEAKSKARDDQSEAEDLVDVLLQYEDGSKQDFSITKNNIKAIILDIFGAGGETSATTIDWAMAEMMKNPRVMKKAQAEVREVFNMKGRVDENCINELSYLKQVVRETLRLHPPVPLLLPRECGQTCEINGYHIPAKSKVIVNAWAIGRDPNYWTKAERFYPERFIDSTIDYKGSDFEFIPFGAGRRICPGITFASRIIELALAMLLYHFDWKLPNGMMSEELDMSDEFGVTVSRKVDLFLVPFPVT 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2398 441 SUPERFAMILY Cytochrome P450 27 438 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2398 441 PRINTS E-class P450 group I signature 233 250 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2398 441 PRINTS E-class P450 group I signature 337 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2398 441 PRINTS E-class P450 group I signature 29 50 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2398 441 PRINTS E-class P450 group I signature 383 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2398 441 PRINTS E-class P450 group I signature 296 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2398 441 PRINTS E-class P450 group I signature 253 279 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2398 441 PRINTS E-class P450 group I signature 373 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2398 441 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 376 385 IPR017972 GO:0005506|GO:0016705
Aed4g2398 441 Gene3D Cytochrome P450 20 434 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2398 441 Pfam Cytochrome P450 27 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2398 441 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 27 439 - -
Aed4g2398 441 PANTHER CYTOCHROME P450 71B11-RELATED 27 439 - -
Aed4g2398 441 PRINTS P450 superfamily signature 297 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2398 441 PRINTS P450 superfamily signature 374 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2398 441 PRINTS P450 superfamily signature 244 261 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2398 Aed-Chr4 26262133 26263760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2398 28 437 Cytochrome P450 AT3G26210 43.571 3.07e-121 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2398 - - gmx:100778572 724.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2398 4 26262133 26263760 Aed4g2398 4 26262133 26263760 ECH