Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2393 ATGTCTTCTTTCAAAAAGAGAAAATCTTGCATTGAAACACCCTGCGATGATGGAAGAAAGAAAGTTCGCATAATGGAAAAGAAGAAAGAAAAGGAAGATGCAGAAAGAAGACATTGGGGCTATTCAACAAAATTGATGCTTTATGATGATCCATGGAAGATCAAGAAAGTGCTTAAAAAGAGTGACATTGGCAAATTGAGTAGACTCCTGCTCTCCAAGAAATTGATAGAGGACTTGGTGCTGCCCGTGTTGACTCTTGAATCCCAAAGAGAGGCAATGAATGAAAAAGGAACCAAAATTACTATTTGGGATGTCGACACTCAATCCATGCACTCTCTTATTTTCAAGTTTTGGACTTCTTCCAAAAGCTATGTTTTCATTGACAACTGGACCAACGATTTTGTCAACAGAAGGAGTTTAAAGATCAATGACAAAATTGGATTTCATTGGGATTCATACAAAAATAGGTTTGATTTTACCATTCTTGAAAAATTTTAG 498 0.3594 MSSFKKRKSCIETPCDDGRKKVRIMEKKKEKEDAERRHWGYSTKLMLYDDPWKIKKVLKKSDIGKLSRLLLSKKLIEDLVLPVLTLESQREAMNEKGTKITIWDVDTQSMHSLIFKFWTSSKSYVFIDNWTNDFVNRRSLKINDKIGFHWDSYKNRFDFTILEKF 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2393 165 CDD B3_DNA 52 162 IPR003340 GO:0003677
Aed4g2393 165 Gene3D - 51 161 IPR015300 -
Aed4g2393 165 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 6 164 - -
Aed4g2393 165 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 6 164 - -
Aed4g2393 165 SUPERFAMILY DNA-binding pseudobarrel domain 50 161 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2393 Aed-Chr4 26241448 26241945 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2393 50 157 B3 DNA Binding Superfamily AT3G26790 30.357 1.93e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2393 - - gsj:114396848 222.631