Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2391 ATGGCTTCTGTGAACAACCGCTGTTTCGTGGAATGGAAAGAGCAGTTTGTTTCGCAGGAACGTGGCAATCGTGTGGTTCACTATTACCTGAAGGATGCTGCTGGGGAATCCATCCTTGCAGTGGTGGGCACTGAGAGGAGTGTTAGACACATGTGCTATGTTGTTGCTGAGGAGTTCCTTGAAATTTGTGGGAAGGAGGGTTCCATTCCAACTGGTTTCAAATGGAGATCTAGAAGAGAGGTGGTGGATTGGCTGACATCAACGCTATCAAAGCAGAACCTGCCGGGAGATAGAAGTGTATCACCTGGTCATAACTTGGTACCAGCTCGTGAGACCACAAATGACAGTGTCAATGAAATTATTGGTCTGTCTGTTCAAATAACAGATGACAAGGACTTTCCAATGAGTAACTCCAAATTATCCAATTCAGACATTGTTTGGTCAGGTGTTGCATGGAGATGTGGCAAACAACTTAAGCACTATCCTGCTTTTTGCAGGAATGGCATCAAAATAGCAATTCAATCATTTGTTTTTGTTATGGGCAAGGGAGAGAATCATTATATTGCTTATGTAGAGGATATGTATGAAGACAGGAGGGGACAGAAAAAAGTCAAAGTGAAGTGGTTTCACCATAATCAGGAAGTCAAGGGTGTAGTTCCTGTACGGAATCCTCACCCTCGGGAAGTTTTTATCACACCTTATTCTCAAGTCATTAGTGCAGAGTGCGTAGATGGTTCTGCCACAGTCTTAACTCGTGAACACTATGAGAAATGCTTGCCTTTTTTTTCCCCCACTTCAAGAGACAGAATACATTTGTGCTTTAGGCAGTTTAGAAGCAACAAAGTGAAGCCCTTTGACTTGAGTAAACTGCGTGGTTACCATGCTCAACCTATTTTTTCTTGCTTGCACCTTGATTCAATCCAGAACCCTGAGAGCCTTGCAGGAGAATATGAAGAGTTGAGTGCAGGTGATGATGTGAAGGTAGGAACCAAGAGGAGAAGAGGTGGTAAGGGGTCTCCTCAGTCTTGGATAAGTTGTCAAGGAGTTAGGAAGTTAATTAGAAGTAAGCAAATGATGGTTTACAAAACCTTCCAGGTTGCAAATTATGCAAGACAAGAAAGGAGATTGCTTTCTCAGAAGCAGGTTGAGTGTCAACCTTGGTCTAACCACACATACAAGGTTGATGACAAGATAGAGTTGCTTTGTCAAGATAGTGGCATCAGAGGCTGCTGGTTCAGGTGTACAGTGGTTCAGGTAGCTCGGAAGCAGTTGAAAGTCCAATATGATGATGTCCAGGATGAAGATGGAAGTGGAAATCTTGAGGAATGGATCCCTGCTTTCAAGCTGGCCAGGCCTGATAAACTTGGGATGAGGCATTCTGGCCGCCCCACCATCAGGCCAGCTCCAACTTATGAGGAACAAGAACTGGCTATCGAGGTTGGAAGTGCAGTTGATGTATGGTGGAGTGATGGATGGTGGGAAGGGGTTGTAACTATAATTGACAACTGTGGTGATGATAGTGTTCAAGTCTACTTTCCTGGTATGCTGTCTTAA 1554 0.4408 MASVNNRCFVEWKEQFVSQERGNRVVHYYLKDAAGESILAVVGTERSVRHMCYVVAEEFLEICGKEGSIPTGFKWRSRREVVDWLTSTLSKQNLPGDRSVSPGHNLVPARETTNDSVNEIIGLSVQITDDKDFPMSNSKLSNSDIVWSGVAWRCGKQLKHYPAFCRNGIKIAIQSFVFVMGKGENHYIAYVEDMYEDRRGQKKVKVKWFHHNQEVKGVVPVRNPHPREVFITPYSQVISAECVDGSATVLTREHYEKCLPFFSPTSRDRIHLCFRQFRSNKVKPFDLSKLRGYHAQPIFSCLHLDSIQNPESLAGEYEELSAGDDVKVGTKRRRGGKGSPQSWISCQGVRKLIRSKQMMVYKTFQVANYARQERRLLSQKQVECQPWSNHTYKVDDKIELLCQDSGIRGCWFRCTVVQVARKQLKVQYDDVQDEDGSGNLEEWIPAFKLARPDKLGMRHSGRPTIRPAPTYEEQELAIEVGSAVDVWWSDGWWEGVVTIIDNCGDDSVQVYFPGMLS 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2391 517 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 5 514 - -
Aed4g2391 517 PANTHER OS07G0607300 PROTEIN 5 514 - -
Aed4g2391 517 SMART BAH_4 169 288 IPR001025 GO:0003682
Aed4g2391 517 Pfam BAH domain 172 277 IPR001025 GO:0003682
Aed4g2391 517 Pfam Agenet domain 395 469 IPR008395 -
Aed4g2391 517 ProSiteProfiles BAH domain profile. 169 288 IPR001025 GO:0003682
Aed4g2391 517 Gene3D - 137 294 IPR043151 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2391 Aed-Chr4 26231167 26236527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2391 404 515 PHD Transcription Factor Family AT5G58610 31.034 1.50e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2391 - - gmx:100306240 995.342
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2391 4 26231167 26236527 Aed4g2391 4 26231167 26236527 ECH