Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2370 ATGGGAACATACGAGGAAAGTTTTGCAAGTGAGGAGGAACATGTCTTTCGAAGCCAATACTCACCTGTTCCTGTCCCTGACAATGTGACATTGCCGGAATTTGTGCTCCAAAATGCAGAATTGTATGCTGACAAGGTTGCATTTGTGGATGCTGTGACTGGAAAAGGGATCACTTTTAGTGAGGTGGTGAAGGGTGTACACAGGTTTTCAAAGGCCTTAAGATCTCTTGGTCTGAGGAAAGGGCATGTTGTAATTGTTGTACTTCCAAATGTAGTAGAGTATGCCATTGTTGCTTTGGGGATAATGGCTGCTGGTGGGGTGTTCTCAGGTGCAAATCCAGCATCACATGTATCAGAAATTAAGAAACAGGCAGAGTCTGCTGATGCCAAACTAATTGTCACAAATGTCACAAACTATGAAAAGTTGCTTGAGGCAGCAGACCGTGCAGGTGATGATTTAAAAAAGGAGGCTATTCAGCAGAGTGATCTTTGTGCCATGCCATTCTCATCAGGCACCACAGGAATGTCAAAGGGTGTTATGCTCACTCACAGAAATCTAGTGGCTAATCTTTGCTCTACACTCTTTAACGTGACCCAAGAAATGGAGGGTCTGGTCACCACACTAGGCTTGATTCCCTTCTTTCACATTTATGGCATCACTGGAATATGTTGTGCCACTCTTAGGAGCAAAGGGAAAGTTGTGGTGATGGGAAGGTTTGAGTTGAAAACCTTTCTCAATGCCTTGATCAAACATGAGGTCACATTTGCACCCATTGTGCCACCTATCATTCTCAGCTTGGTTAAAAATCCAATAGTGGATGAATTTGACCTCAGCAAGCTAAAACTCCAGGCCATTATGACTGCAGCAGCTCCACTTGCACCAGAACTCCTTAATTCTTTTGAACACAAGTTCCCTGGTGTTGCTGTCCAAGAGGCATATGGACTAACTGAACATAGCTGCATCACACTGACTTATGCACAAAAAGGGTTGGGAAGTACTCGTAAAAACTCAGTAGGGTTCATCCTCCCAAATTTGGAAGTCAAGTTTGTTGATCCTGACACTGGTCGATCCCTCCCAAGGAAAACACCAGGGGAACTTTGTGTAAGAAGCCAATGTGTAATGCAAGGTTACTATAAACAAGAGGATGAGACTGCACAGAGCATTGACAAGAATGGATGGCTTCACACAGGTGATGTAGGATTCATAGATGATGAAGAAAATGTGTTTATCATTGATCGTATCAAGGAGTTGATTAAATTACCAGATGAAGAGGCAGGGGAAATCCCAGCTGCAAGTGTTGTATTAAGTCCAGGTGCAAAAGAGAGTGAGGAGGACATCATGAACTATGTTGCCTCCAATGCTGCACGCTACAAGAAAGTGAGAGTGGTGCACTTTGTGGAAGCCATACCAAAGTCACCCTCTGGGAAAATTATGAGGAGGCTTGTCAAAGAGAAGATGGTGGAAAAGATTAAGACAACAAACTCCTTAACAAAATCTAAGAATATCTAA 1509 0.4321 MGTYEESFASEEEHVFRSQYSPVPVPDNVTLPEFVLQNAELYADKVAFVDAVTGKGITFSEVVKGVHRFSKALRSLGLRKGHVVIVVLPNVVEYAIVALGIMAAGGVFSGANPASHVSEIKKQAESADAKLIVTNVTNYEKLLEAADRAGDDLKKEAIQQSDLCAMPFSSGTTGMSKGVMLTHRNLVANLCSTLFNVTQEMEGLVTTLGLIPFFHIYGITGICCATLRSKGKVVVMGRFELKTFLNALIKHEVTFAPIVPPIILSLVKNPIVDEFDLSKLKLQAIMTAAAPLAPELLNSFEHKFPGVAVQEAYGLTEHSCITLTYAQKGLGSTRKNSVGFILPNLEVKFVDPDTGRSLPRKTPGELCVRSQCVMQGYYKQEDETAQSIDKNGWLHTGDVGFIDDEENVFIIDRIKELIKLPDEEAGEIPAASVVLSPGAKESEEDIMNYVASNAARYKKVRVVHFVEAIPKSPSGKIMRRLVKEKMVEKIKTTNSLTKSKNI 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2370 502 PANTHER 4-COUMARATE--COA LIGASE-LIKE 1 8 141 - -
Aed4g2370 502 Pfam AMP-binding enzyme 37 420 IPR000873 -
Aed4g2370 502 Pfam AMP-binding enzyme C-terminal domain 421 476 IPR025110 -
Aed4g2370 502 Gene3D - 13 414 IPR042099 -
Aed4g2370 502 PANTHER 4-COUMARATE--COA LIGASE-LIKE 1 137 419 - -
Aed4g2370 502 PANTHER 4-COUMARATE--COA LIGASE-LIKE 1 418 489 - -
Aed4g2370 502 SUPERFAMILY Acetyl-CoA synthetase-like 17 490 - -
Aed4g2370 502 Coils Coil 136 156 - -
Aed4g2370 502 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 137 419 - -
Aed4g2370 502 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 418 489 - -
Aed4g2370 502 Gene3D - 415 491 IPR045851 -
Aed4g2370 502 ProSitePatterns Putative AMP-binding domain signature. 166 177 IPR020845 -
Aed4g2370 502 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 8 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2370 Aed-Chr4 26072796 26075578 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2370 11 487 Monolignol Biosynthesis Gene Families AT1G62940 63.842 0.0 675
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2370 K01904 - gmx:100811418 907.901