Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2366 ATGTACTACTTACAAACTATCATCATCTTCTTCTTCATAACAACAGCAAGCACCTTGCAATTCAGCTTCCCCTCCTTCACCCTCCGCAACATCACCCTCCTCGGCGACTCCTTCCTCCGCGACGGCCTTGTCGGCCTCACCCGCTCCACCCCCGTCCCCGCCTCCTCCTCCGGCACCCTCCTCTACAACCACCCCATCACCACCACCCCCTCCCTCTCCTCTCTTTCCACCACCTTCACTTTCTCCATCACCAACACCACCACCACCACCACCACCACTTCCACCACCACCTTCACCTTCTTCCTCAACTCCTCCCTCTCCCTCATCTTCCACCCCTATCAAAACCACCTCACCCTAGACTTAACCACTCCAAACTCCACCCTACCCAACCCAACTACACTCATTCATGATCTCAACATCTACAATATTCCAATCACTTCCTGGCTTGACTACCATGCTCACAACAATAAACTCTACGTTTTCTTAAACTATTCAACAACACCACCTCCTTCTTCTTCTTCTTCCAAGCCTCAAAATCCAATCTTGAGCGTTGACCTTGACCTCTCTCACTACTTTAAGGACGATCTCTACGTGGGGTTCTCGGGTTCAACGCTAGGAAGCACCGAGCTTATTCAACTCATGAGTTGGAGCTTCGACTTTGACTCGTTTCAGAAACCCGGTTTAAGCTTGCACCCCCACATCAACGGTTCTATAAGCCCCTCGACTGTTGCGGTTGAGGGAATTCCCGTTTCTTCAAACTCCACTAATGCTAGCAACCATGGCAAGAGATTTTTCTTTGGTGTTGCTTTAGCCATTGCCGGTCCTGCTTTTTTCTGCGTGCTGTTTGTGATTTTGGGCTATGTTTCTTTCCTCAAGTGGCGCGGTGTGAGGAAGCAGAGAAGTTTTGGGACAGTGGGGCGTTGTCCTAAGGAGTTTGGTTACAAGGAATTGAAGTTAGCCACTAAGGGGTTTCACGCTTCAAGGGTAATTGGGAAAGGGTCGTTTGGGACAGTGTACAAGGCTTTGTTTGATTCTTCAGGGACCACAACCATTGCCGCGGTTAAAAGATCAAGACAATACTCTCACGAAGGAAGAACAGAATTTCTGGCTGAGCTTTCAGTAATAGCTGGTTTGAGGCACAAAAATTTGGTCCAACTCCTAGGTTGGTGTGTTGAGAAGGGTGAATTGCTGCTTGTGTATGAGTTCATGCCAAATGGGAGCTTGGACAAGGTGCTTTACCAAGAAAGTGAAGACAATGTGTTGAGTTGGGTTCATAGGGTAAACATTGCTGTTGGGTTGGCTTCTGTGTTGAGTTACTTGCACCAAGAACTGACACCAAAGCACCCACATGTGTTGGCCTGTCTGTGTGCTAATCGATTTGAATTGTTTTTCTATTCTACTCATATGGATTAA 1413 0.4798 MYYLQTIIIFFFITTASTLQFSFPSFTLRNITLLGDSFLRDGLVGLTRSTPVPASSSGTLLYNHPITTTPSLSSLSTTFTFSITNTTTTTTTTSTTTFTFFLNSSLSLIFHPYQNHLTLDLTTPNSTLPNPTTLIHDLNIYNIPITSWLDYHAHNNKLYVFLNYSTTPPPSSSSSKPQNPILSVDLDLSHYFKDDLYVGFSGSTLGSTELIQLMSWSFDFDSFQKPGLSLHPHINGSISPSTVAVEGIPVSSNSTNASNHGKRFFFGVALAIAGPAFFCVLFVILGYVSFLKWRGVRKQRSFGTVGRCPKEFGYKELKLATKGFHASRVIGKGSFGTVYKALFDSSGTTTIAAVKRSRQYSHEGRTEFLAELSVIAGLRHKNLVQLLGWCVEKGELLLVYEFMPNGSLDKVLYQESEDNVLSWVHRVNIAVGLASVLSYLHQELTPKHPHVLACLCANRFELFFYSTHMD 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2366 470 SUPERFAMILY Protein kinase-like (PK-like) 314 442 IPR011009 -
Aed4g2366 470 Gene3D - 16 222 - -
Aed4g2366 470 SUPERFAMILY Concanavalin A-like lectins/glucanases 16 222 IPR013320 -
Aed4g2366 470 ProSitePatterns Protein kinases ATP-binding region signature. 330 355 IPR017441 GO:0005524
Aed4g2366 470 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.7-RELATED 12 444 - -
Aed4g2366 470 Pfam Legume lectin domain 114 221 IPR001220 GO:0030246
Aed4g2366 470 Pfam Legume lectin domain 19 105 IPR001220 GO:0030246
Aed4g2366 470 Pfam Protein tyrosine and serine/threonine kinase 326 443 IPR001245 GO:0004672|GO:0006468
Aed4g2366 470 PANTHER - 12 444 - -
Aed4g2366 470 Gene3D Transferase(Phosphotransferase) domain 1 295 460 - -
Aed4g2366 470 ProSiteProfiles Protein kinase domain profile. 324 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2366 Aed-Chr4 26038336 26040761 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2366 5 450 Receptor kinase-like Gene Family AT5G55830 42.771 6.84e-113 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Aed4g2366 PK_Tyr_Ser-Thr 4.9e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2366 - - gmx:100808744 573.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2366 4 26038336 26040761 Aed4g2366 4 26038336 26040761 ECH