Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2353 ATGGAAATTGGGAGAGAGGATGATGAGATTGTGAACATGTCAATGTCACCCCCATTAGTTGGTTCTACTAACAAAGAGTTCATGTCTCAGACTCAGGCATATCTTCAGAATAAGTACTCAGATATTGACATAGAAATTGAAGGTTCCAATTTGGAACAAAATCGCCCCCTCCCCATATTTCTCAAGTTTGAAGATGTGGAGTATAAGGTGAGAAATAGCAAAGCTGGCTCAAGTAACCTTGTGAAGACAATGGTGTCAAAGGTATCAACACAACTCACTGTGGAAAAAGATAGATATAAGAAAATTTTGAAGGGAATCACAGGAAGCATAGGCCCTGGTGAAATTCTTGCTCTAATGGGTCCTTCTGGCAGTGGGAAGACAACCTTGTTGAGAGTCATAGGAGGAAGATTAGTTGACAATGTCAAGGGAAAAGTAACTTACAATGATGTTTCTTTTAATCCAGCTGTCAAGAGAAGGATTGGATTTGTGACACAGGAGGATGTGCTTTACCCTCAATTAACTGTTGAAGAAACTTTAGTTTTCTCTGCACTCTTGAGGCTACCAACCAATATGAGCAAGCAGCAAAAATATGCAAAAGTGGATACCACTATCAAGGAGCTAAGCCTTGAAAGATGTCGCCACACAAAAATAGTTGGAGGATATCTCAAAGGCATATCAGGAGGAGAAAGGAAGAGAACCTGCATAGGCTATGAAATTCTTGTTGATCCTTCATTGTTGCTACTTGATGAACCAACTTCTGGCCTTGATTCCACTGCAGCAAACAAACTCCTTCTCACACTTCAAGGACTTGCTAAGGCTGGAAGGACTATAATTACAACAATACATCAGCCATCCAGCAGAATCTTTCACATGTTTGACAAACTTCTTCTAATATCAGAAGGCTATCCTATTTACTATGGAAAGGCTAAGGACGCGATGGAGTACTTTTCATCCCTGAGATTCACCCCACAGATACCAATGAATCCTGCTGAGTTCTTGCTTGACTTGGCAACTGGACAAGTGAATGACATAAGTGTTCCAACAGATATCTTGCCTGATCAAGAATCTTCTGAGTCTTCAAAAGTTGTTATTGAATATCTACAACTCAAATACAAAACTCTACTGGAGCCAAAAGAAAAAGAAGAGAACCATAGAGAAGAAAACACACCAAAACATCTTCAGCTAGCCATTCAGGTTAAGAAGGAGTGGACATTGAGTTGGTTGGACCAGTTTGTGATTCTTTCAAGGAGAACATTCAAAATAAGAAGCAAGGACTATTTTGATAAGCTAAGACTAGTTCAAGCACTTGGGGTTGCACTTTTGCTGGGGCTCCTTTGGTGGAAATCTTCAACCAACACTGAAGCTCAACTCAGAGATCAGGTTGGTTTGGCATTCTACATATGTATATTTTGGACATCTTCATGTCTTTTTGGAGCAGTCTATGTCTTTCCATTTGAGAAGTACTACTTGCTAAAAGAAAGGAAATCTGACATGTATAGACTAAGTGTATACTATGCATGTAGCACTCTATGTGACATGGTGGCACACGTTCTCTATCCTACTTTTTTCATGGTCATCTTGTACTTCATGGCTGGTTTTAAGAGAACTGTTGCTTGCTTCTTCCTAACACTATTAACTATTCTGTTAATTGCCATAACAAGTCAAGGGGCAGGAGAACTATTTGGAGCTGCAATCATGAGTGTTCAAAGAGCAGGGGCAGCTGCTTCTTTGATACTAATGTTATTCCTTCTCACAGGTGGCTACTATGTCCAGCACATACCAAAGTTCATGAGGTGGTTGAAGTATTTGTCATTCATGTACTATGGTTTTAGGCTTCTTCTAAAAGTGCAGTATTCAGGAGACCAATTATATGATTGTGAGAGCAAGGGAGGGTGCAGGACCCTTCAGAGTTCACCTACATTTGCCATTCATGGCAGGACATGTTCCGATCCGCCTCCACTCGCCACCCCACCCCCACCCCCTCAATCCCACGCGCCGCCTTCCCAATCCCACGCGCCGACGAATCCGCAAACTGAGGGCGACCCAGATGGAAAAAACAAATTTTCCGGCGATCCCCAGGTACGGTTGGCTCTTTACATCGCCATGGCCCATGCAGGTATCGCCTTCGCCATTTTCATTCTCTACACCTTCTCGAAGCTTCTAGAACAGTATCTAAGACCACTTCAATGGGGTGTGTTGTGTTCCATTCCCCTTAGGGGCATTCAGCAAGCCCTCGTTGCGTTTTGGTCCGAACCCCTTCATATGGGTCTCACAGAAACCGTTCTCGCTGTTCCCGTTTCTATTTTCAGGGTTTTTGTTGGCACACTCGTTGAGATTCGTGAAGCTTCTTTCAGAGTCATTTTTAGGAAACCAAAGCCTCGCCAGAATCACCCTTCAAGGAGGCGTAGTGGGTTTTCCAAGTTGCTTCGTTTGCTTGTGTCTTTTGAGATTTTCATCATTGTTTATGAGAGGCTTGGTGGGTATGGGGCATTGTCACTTTTGGGGTTGGGTTTTTTGTTCAGTTCAAAGAATGTGGATTCAACTATGCACACTTTGTCTTCTATGAGGACTCTCAGTTTCAGGCGTAGTATAATTGGTGCCTTTTTCACTAGAGGGATATTGAGGAAGTTGAAGATTATTGTGGCAATTTCGTTGATTGTTGGCATGATTGTGGGGTTTTTGAGTGGAGTCATTTTCTTCTCTTATAAGATTGGTGTTGAAGGGAAAGATGCAGTGATATCATTGAAATTGCATGTGGAGGAGAGCAATTATGCTGAGAGGATTGGTGTTAAGAAGTGGATGGAGGAGAATGATGTTGCTGGGATGGTGGATAGTTACACTACAAAGATATATGAGACTGTGTCTGATCAGATAGATGGCTTGGCTGTGCAGTATAACATGACTGAATTTGTCACTGGCATTAAGCATTTTGTGATATCCACTCCGGTTAACTCTTCAGTGCCTTCAAAAGACTTGATGACTCCCTCGCCTTACGCCGCACAGTTCTTGAGCTTGAAAACACGGGTTAGGAACCGCGAATGGAGCCAGATTTATACAGAGCTTGACTCGATTTTTAGTGAGCTTGTGATCACTCGCAAGGATTTGGTTGAGAAGGCAAAAGGGTTTGCCTTCAAAGGAATTGATGTGTCTCAGCGAATTTTTGTTAGTAGTATAACTGTGCTTGGAAGCAGTACCAAGTTTATGTTCTCCATTGCGAATTCCATAATATCTGGAGCCGCAGAGGTTTTCAATTTTGTGTCTCAGTCAATGGTGTTTATTTGGGTTTTGTATTATCTCATCACATCAGAGAGTGGTGGAGTAACAGAGCAAGTGATGTACATGCTTCCAATTCCAAACTCCGCTAGGGTCAGATGTGTTGAGGTTTTGGATAAAGCTATTTCAGGAGTCCTTTTGGCCACTGCTGAGATTGCATTCTTTCAAGGATGTCTTACTTGGCTTTTGTTTAGGTTGAACAAAATACACTTCTTGTACATGTCAACTGTGCTTGCATTAATAAGTCCTCTCTTGCCAATATTTCCATCTTGGCTTGCAACAATCCCAGCAGCCTTGCAACTAGTGGTGGAAGGAAGATACATAATGGCCATTGTGTTGTCTATTATTCACCTTTTTCTCATGGACTATGGCTCATCGGAGATTCTAGAAGACGTGCCGGGGAATAGTGCATATCTCACTGGGCTGAGCATCATTGGAGGAATGACATTATTCCCATCTGCTCTGGAGGGAGCTATTATGGGACCATTAATAACTACAGTTATGATTGCACTGAAGGATTTGTATACTGAATTTGTTTTGCAAGAACCTAAGGACAATGCCAAGAAGAAAACCAGCTAG 3852 0.4219 MEIGREDDEIVNMSMSPPLVGSTNKEFMSQTQAYLQNKYSDIDIEIEGSNLEQNRPLPIFLKFEDVEYKVRNSKAGSSNLVKTMVSKVSTQLTVEKDRYKKILKGITGSIGPGEILALMGPSGSGKTTLLRVIGGRLVDNVKGKVTYNDVSFNPAVKRRIGFVTQEDVLYPQLTVEETLVFSALLRLPTNMSKQQKYAKVDTTIKELSLERCRHTKIVGGYLKGISGGERKRTCIGYEILVDPSLLLLDEPTSGLDSTAANKLLLTLQGLAKAGRTIITTIHQPSSRIFHMFDKLLLISEGYPIYYGKAKDAMEYFSSLRFTPQIPMNPAEFLLDLATGQVNDISVPTDILPDQESSESSKVVIEYLQLKYKTLLEPKEKEENHREENTPKHLQLAIQVKKEWTLSWLDQFVILSRRTFKIRSKDYFDKLRLVQALGVALLLGLLWWKSSTNTEAQLRDQVGLAFYICIFWTSSCLFGAVYVFPFEKYYLLKERKSDMYRLSVYYACSTLCDMVAHVLYPTFFMVILYFMAGFKRTVACFFLTLLTILLIAITSQGAGELFGAAIMSVQRAGAAASLILMLFLLTGGYYVQHIPKFMRWLKYLSFMYYGFRLLLKVQYSGDQLYDCESKGGCRTLQSSPTFAIHGRTCSDPPPLATPPPPPQSHAPPSQSHAPTNPQTEGDPDGKNKFSGDPQVRLALYIAMAHAGIAFAIFILYTFSKLLEQYLRPLQWGVLCSIPLRGIQQALVAFWSEPLHMGLTETVLAVPVSIFRVFVGTLVEIREASFRVIFRKPKPRQNHPSRRRSGFSKLLRLLVSFEIFIIVYERLGGYGALSLLGLGFLFSSKNVDSTMHTLSSMRTLSFRRSIIGAFFTRGILRKLKIIVAISLIVGMIVGFLSGVIFFSYKIGVEGKDAVISLKLHVEESNYAERIGVKKWMEENDVAGMVDSYTTKIYETVSDQIDGLAVQYNMTEFVTGIKHFVISTPVNSSVPSKDLMTPSPYAAQFLSLKTRVRNREWSQIYTELDSIFSELVITRKDLVEKAKGFAFKGIDVSQRIFVSSITVLGSSTKFMFSIANSIISGAAEVFNFVSQSMVFIWVLYYLITSESGGVTEQVMYMLPIPNSARVRCVEVLDKAISGVLLATAEIAFFQGCLTWLLFRLNKIHFLYMSTVLALISPLLPIFPSWLATIPAALQLVVEGRYIMAIVLSIIHLFLMDYGSSEILEDVPGNSAYLTGLSIIGGMTLFPSALEGAIMGPLITTVMIALKDLYTEFVLQEPKDNAKKKTS 1283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2353 1283 MobiDBLite consensus disorder prediction 668 682 - -
Aed4g2353 1283 Pfam ABC transporter 103 253 IPR003439 GO:0005524
Aed4g2353 1283 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 100 318 IPR027417 -
Aed4g2353 1283 MobiDBLite consensus disorder prediction 648 687 - -
Aed4g2353 1283 Gene3D - 85 320 IPR027417 -
Aed4g2353 1283 PANTHER TRANSMEMBRANE PROTEIN C9ORF5 PROTEIN 661 1277 - -
Aed4g2353 1283 MobiDBLite consensus disorder prediction 651 667 - -
Aed4g2353 1283 Pfam AI-2E family transporter 1067 1264 IPR002549 -
Aed4g2353 1283 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 61 325 IPR003439 GO:0005524
Aed4g2353 1283 SMART AAA_5 112 303 IPR003593 -
Aed4g2353 1283 PANTHER TRANSMEMBRANE PROTEIN 661 1277 IPR002549 -
Aed4g2353 1283 CDD ABCG_EPDR 91 307 - -
Aed4g2353 1283 Pfam ABC-2 type transporter 410 618 IPR013525 GO:0016020|GO:0140359
Aed4g2353 1283 Pfam ABC-2 type transporter 282 377 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2353 Aed-Chr4 25935879 25945368 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2353 101 286 Calmodulin-binding Proteins AT2G36910 28.230 1.00e-10 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2353 K05681 - gmx:100806094 1142.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2353 4 25935879 25945368 Aed4g2353 4 25935879 25945368 ECH