Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2352 ATGGCTTCATTTCCTTCAAATTCTTCAGTAGAGCATAGCATGGCCAGTTCACAAAACAGTGCTTCCTCACCTTCTTTCATGACTAGAGTAGCCATGAGAATGTCTAGATCAAGATGGTTCACCTTCTTGAGAAGAGTATTCCACTACCAAAATGGACCAAGATCTGATCTTGGCTCCAACCCTTTCAATTCTTGCACTTGGATGATGCTGGAGTTGATTGCTTTGTTGGTTCAGATAACAAGCACAACATTCACTTTGGCCATTTCAAAGAGTGAGAAGCCAGTTTGGCCTATGAGGGTGTGGATAGCAGGTTATGATATTGGTTGTGTTCTTAATCTGCTTCTACTTTGTGGTCGCTACCATCAACTTCGTGTGACTCAAGGGAATGCTCTTAGCCTCTCAGAATTGGAGCAGCAGAGAAACAATGAAGAATCAAGAGCCTTATCAATTATCATTGTAGTGGACCTATGGGTGTGCACATGCATGTGCACATGGGGGAAACAAGAGAAGAATGAGAACTGGAGAGGGGTCAGAGCATTGATGAAGATTTAA 552 0.4275 MASFPSNSSVEHSMASSQNSASSPSFMTRVAMRMSRSRWFTFLRRVFHYQNGPRSDLGSNPFNSCTWMMLELIALLVQITSTTFTLAISKSEKPVWPMRVWIAGYDIGCVLNLLLLCGRYHQLRVTQGNALSLSELEQQRNNEESRALSIIIVVDLWVCTCMCTWGKQEKNENWRGVRALMKI 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2352 183 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 11 149 - -
Aed4g2352 183 MobiDBLite consensus disorder prediction 1 22 - -
Aed4g2352 183 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 11 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2352 Aed-Chr4 25931003 25933339 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2352 12 147 C3H Transcription Factor Family AT5G55970 64.964 1.12e-61 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2352 - - gmx:100818715 263.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2352 4 25931003 25933339 Aed4g2352 4 25931003 25933339 ECH