Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2339 ATGCTTGCCCTCCCACCCCCACCCCTAGCCACAAGGCAAACCAAACAAGTCTCTCCCGACCAAATAGTCATATCAAAACAACCAATCAAACAACATTTTCAAGAATCAAATCCACCAAATAATGTGACAACAAAGTCAACTAGGCCACCACCACCACCACTAAGGCAACCTCAATTTCAAAGGACTAATCCAATCATATGGTTTGGTGCAGTGCTGTGCCTCATATTCAGCCTTGTTCTCATCCTCTTTGGTGTTACAACTTTGATTATCTTCCTTGGCATCAAGCCAAGAAACCCCACCTTTGACATCCCCAATGCAAACCTCAATGCACTGTACTTCGACTCACCACAATACTTCAATGGTGACTTCACCCTCCTTGCAAACATCACCAACCCCAACGGGAAAATTGATGTGAGGTTTGAGTCCTTTGATGTTGAGCTTTTCTTCTCAGACAGGATCATATCAACACAGTCCATTCGGCCCTTTACTCAGAGGAGAAGAGAGAGCAGGTTGGAGTCCTTGCACTTCATATCAAGCTTGGTGTTCTTGCCTAAGGATCTTGGTGTGAACCTTAAAGGACAGGTGCAGGGTAATATGGTTAAGTACAACGTAAGAGGAACCTTTAAAGTGAGAGCAAGTATGGGGTTCTTCCATTTGTATTACTGGTTGCATAGCAGATGCCAGATTGAGATGACTGCTCCACCAACTGGTGTCTTGGTAGCTAGGAAATGCATCACAAAGAGATGA 747 0.4444 MLALPPPPLATRQTKQVSPDQIVISKQPIKQHFQESNPPNNVTTKSTRPPPPPLRQPQFQRTNPIIWFGAVLCLIFSLVLILFGVTTLIIFLGIKPRNPTFDIPNANLNALYFDSPQYFNGDFTLLANITNPNGKIDVRFESFDVELFFSDRIISTQSIRPFTQRRRESRLESLHFISSLVFLPKDLGVNLKGQVQGNMVKYNVRGTFKVRASMGFFHLYYWLHSRCQIEMTAPPTGVLVARKCITKR 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2339 248 MobiDBLite consensus disorder prediction 1 56 - -
Aed4g2339 248 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 35 248 - -
Aed4g2339 248 MobiDBLite consensus disorder prediction 11 43 - -
Aed4g2339 248 Pfam Late embryogenesis abundant protein 128 225 IPR004864 -
Aed4g2339 248 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 35 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2339 Aed-Chr4 25819763 25820509 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2339 - - gmx:100803431 435.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2339 4 25819763 25820509 Aed3g2616 3 28106155 28106847 PCT