Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2337 ATGAGCGATTCTGCATACAGAGTCGAAACCACACCACGCCTTGCTCAATGGAGAATCGAAAACTTGGCTTCTTGCACTTACCGAAAATCCGATCCTTTCAAGATCGGAAAGTGGAACTGGCATTTGTCAGTAGAGAAGAACAGGGTTTTGTTTGTTAAACTGTTCCCAGAAATATCCAATCTTACAAGAGACAACCCTCCAATTGCATCTTTCATCGACAAAGTGCTAAAGAACAACGAGGATTTTGTTTGGGCAATTGAGGTTCCACTAACTGGAAAATTCATTATTGACGTTGAGTTTCTTGACTTGAAGATTCCATCCCCAAACGGTGGAGAACCTTGTTCCATTTGGGCTGAAGGATTTACTCAGCAAAGATCAAATGCAAAAGCCATAGAATCTCTTGGTAAAATGCTAACAGAAGGCATCCACACAGACATCACCATCAATGCTTCTGATGGAAGTATAGGAGCTCATCGAGCTCTTCTTGCTGCCAGATCACCCGTCTTCCGCAGCATGTTCTCACATAATCTTCAAGAGAAAGAGTTGTCAACCATAAACATCTCAGACATGTCACTTGAATCATGCCAGGCTCTTCTCAACTACCTTTATGGTATCATCAAACATGAAGAGTTTCTGACTCATAGGCTGGTCCTTCTGCACGCGGCTGACAAGTATGACATTTCTGACTTGAGAGATGTATGCCATGAGAGTCTTCTGGAAGACATTGACACAAAGAATGTACTTGATAGGCTCCAAAATGCATCACTATATCAGTTGCTGAAACTGAAGATGAGTTGCATCCGATATCTTGTGAAGTTTGGTAAAATATATGAAATTCGTGATGATTTCAATACCTTCCTGCAAAATGCAGATAGGGATCTGATTGCTGAAGTCTTCCATGAAGTTCTTGATGCTTGGAAAGGATTCTGA 930 0.414 MSDSAYRVETTPRLAQWRIENLASCTYRKSDPFKIGKWNWHLSVEKNRVLFVKLFPEISNLTRDNPPIASFIDKVLKNNEDFVWAIEVPLTGKFIIDVEFLDLKIPSPNGGEPCSIWAEGFTQQRSNAKAIESLGKMLTEGIHTDITINASDGSIGAHRALLAARSPVFRSMFSHNLQEKELSTINISDMSLESCQALLNYLYGIIKHEEFLTHRLVLLHAADKYDISDLRDVCHESLLEDIDTKNVLDRLQNASLYQLLKLKMSCIRYLVKFGKIYEIRDDFNTFLQNADRDLIAEVFHEVLDAWKGF 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2337 309 CDD BTB_POZ_ZBTB_KLHL-like 143 225 - -
Aed4g2337 309 PANTHER OS08G0495500 PROTEIN 1 309 - -
Aed4g2337 309 SUPERFAMILY POZ domain 130 240 IPR011333 -
Aed4g2337 309 SMART BTB_4 144 242 IPR000210 GO:0005515
Aed4g2337 309 Pfam BTB/POZ domain 136 240 IPR000210 GO:0005515
Aed4g2337 309 ProSiteProfiles BTB domain profile. 144 203 IPR000210 GO:0005515
Aed4g2337 309 PANTHER OS08G0495500 PROTEIN-RELATED 1 309 IPR044714 -
Aed4g2337 309 Gene3D Potassium Channel Kv1.1; Chain A 121 272 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2337 Aed-Chr4 25807922 25810704 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Aed4g2337 BTB 3.9e-22 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2337 K10523 - gmx:100790186 598.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2337 4 25807922 25810704 Aed3g1830 3 22739454 22744561 PCT