Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2335 ATGAATAGGCACAAAGCCTACTTTGTTCTCATAGCCTTGGAGTTAACTTGTGTTGGAATTAAGTACGGTGTCTCCAACACCAATCCCTTTCAACAACTAAGTCCAACCATAATGATTTTCCTCCTTTCTATATTTTCCCATGTTCTTGCATTCATTGCTGACATGAGCTTGCCAAGTACAAACATAACATTCCATGTATCAGGAGTAGTTGGATGTGAGGCACTGCTTTGGATTCTCCTTGCTGAGTTATTGTGGTACACTATCATTAACCTACTTCTTTTACTACTAGCCTCCTACTTCTTCAACTACATTGCTAATATCACTCAGATGTTTCGTAATGTAAGCAGATCAATTCAATTTGCTTCAGTTTTCAGACACACTCTCGTCACTCTCGTCAGTTTTCATTCTCAGGCTCGACTCCCTCTCCCTCTCGACTCATCTTCTTACGCTGCCATCGGCCTCGTTGCAACTGCATCTTTCTTCACTTCACGTACGGAGGTGGTGAATCCCATAATTTCAGAAGAAAATGGAGGGCCAGAAAAATGTTCAATTGATGTTGAAGAACAAATTCCAAAGATTGGAAAGGTATTAGATTCTGAAGAGGAACTTCATACCTTTTATGAGAAATATGCTTATGAAGTTGGATTTGGGATTCGAAAAATTAGCACAAAAACAAAGGGTGAAGTCAAGTATTATGCACTTGCATGTTCTAAAGGAGATAAAGCAAAGGAAAAGCTTAAGGATGATTTGAGTTGGGATATTAGTAAACAAACTACTCCACCAAGTCAGTGGACAAGGAGTATCAAACATTTGGAACCATGCCCTCTAGTGATAGAAGCTTTGATCTCAACCACTAATGATATAGTAGCAGTTCATAGCTTTAAATCTGATGCAGGGGTTTATGCAGCAGCTGGTTGGGACGTTTTGTTGAGGACACACTCATCAGTTTTTTTCATTCTCAACCTCTCATCACGCTCTCGTCTTCTCGCGCCTTTCTTCACTTGCAGAATGGAGTCAAATCAGGCATCTTCTTCCATGGAAGTTGAAACTGTCCCCTCTGAAGCCACACTTTTACCACCAAAGCCAAAGTTTGAGCCTTTGAAACCTCATGAGATGTCTGATGGTCAGGTTCAGTTTCGCAAGGTGAATGTTCCGCCTCATCGTTATACCCCTCTCAAGAAAGCTTGGATGGATATCTATACTCCGATATTCGGGCAGATGAAAATTGATGTCCGTATGAATTTGAAGGCCCGTAGAGTTGAGCTGAAGACAAGGCTTGATACACCTGATATTAGTAACCTGCAAAAATGTGCTGATTTTGTCCATGCTTTCATGTTGGGTTTTGATGTCATAGATGCCATTGCTCTTCTGCGTCTTGATGAGCTCTACATTGAGTCCTTCGAGATCAAGGATGTTAAAACACTTCGAGGTGATCACTTGTCTCGTGCTATTGGAAGGTTGTCTGGTAAAGGTGGTAAGACAAAGTTTGCGATTGAGAATGCGTCGAAGACAAGAATCGTGATTGCAGACACCAAAATTCACATATTGGGATCTTTTGCCAACATAAAGATTGCCAGGGATTCTCTTTGTAGCCTGATTCTAGGATCACCAGCAGGAAAGGTGTATTCAAAACTAAGAGCAGTTACCGCTAGATTGGCGGAAAGGTTTTGA 1671 0.4123 MNRHKAYFVLIALELTCVGIKYGVSNTNPFQQLSPTIMIFLLSIFSHVLAFIADMSLPSTNITFHVSGVVGCEALLWILLAELLWYTIINLLLLLLASYFFNYIANITQMFRNVSRSIQFASVFRHTLVTLVSFHSQARLPLPLDSSSYAAIGLVATASFFTSRTEVVNPIISEENGGPEKCSIDVEEQIPKIGKVLDSEEELHTFYEKYAYEVGFGIRKISTKTKGEVKYYALACSKGDKAKEKLKDDLSWDISKQTTPPSQWTRSIKHLEPCPLVIEALISTTNDIVAVHSFKSDAGVYAAAGWDVLLRTHSSVFFILNLSSRSRLLAPFFTCRMESNQASSSMEVETVPSEATLLPPKPKFEPLKPHEMSDGQVQFRKVNVPPHRYTPLKKAWMDIYTPIFGQMKIDVRMNLKARRVELKTRLDTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGDHLSRAIGRLSGKGGKTKFAIENASKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2335 556 PANTHER RIBONUCLEASE Y 341 556 - -
Aed4g2335 556 Gene3D K Homology domain, type 1 460 556 IPR036612 GO:0003723
Aed4g2335 556 CDD KH-I 481 527 - -
Aed4g2335 556 PANTHER RNA-BINDING PROTEIN PNO1 341 556 IPR039912 -
Aed4g2335 556 SMART kh_6 461 534 IPR004087 GO:0003676
Aed4g2335 556 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 461 555 IPR036612 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2335 Aed-Chr4 25793738 25800672 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aed4g2335 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2335 K11884 - gmx:100788055 412.92